Human Herpesvirus 8
 EBV-KSHV Proteome Comparison  

This graphical representation of the alignment of the Epstein-Barr virus and the Kaposi's sarcoma herpesvirus genomes was drawn by Bugspray, a genome comparison tool. The alignment is based on protein similarity using BLAST2 with a cutoff for a best hit of p = 0.0001. In this case Bugspray conected the start of a protein from the EBV genome on the top with the respective start of the best hit from the KSHV genome on the bottom. A green line represents a pair of genes found on strands of the same sense and red lines connect pairs of genes from strands of the opposite sense. The 49 pairs of genes in this alignment are clearly from opposite strands and show almost complete conservation of gene order. They are listed below along with the E value of the best BLAST hit.

Gene ID Start Stop Gene ID Start Stop E value
EBV00117365692KSHV0811626821587921e-127
EBV0175852556948KSHV0731430091446462e-90
EBV0185889159901KSHV0721427491419341e-45
EBV0195980861583KSHV0711420001407112e-23
EBV0206150762037KSHV0701406841401726e-09
EBV0217152762078KSHV0691322411401485e-38
EBV0227523876332KSHV0671294351284404e-48
EBV0237523971520KSHV0681294491322356e-21
EBV0247640778887KSHV0661284351260571e-165
EBV0257890079808KSHV0651260281251111e-99
EBV0267989981113KSHV0641249801237906e-22
EBV0278111882191KSHV0631237851227123e-19
EBV0288405982743KSHV0591109581117856e-13
EBV0308688184257KSHV0571076771102081e-134
EBV0318692487580KSHV0581076891070063e-48
EBV0328847487638KSHV0561059081068643e-32
EBV0338854788855KSHV0551059061055747e-15
EBV0348892589413KSHV0541054381050432e-11
EBV043105182106114KSHV05110077999871 5e-15
EBV044105183103366KSHV0521009751028672e-07
EBV047109958110371KSHV0499815697653 4e-07
EBV048110353111120KSHV0489764596878 3e-73
EBV050114204116045KSHV0469319491377 1e-163
EBV051114259111830KSHV0459313395499 0.0
EBV052115948116784KSHV0449151390677 3e-37
EBV054119080117515KSHV0428854989922 1e-09
EBV055119137120354KSHV0418841687214 8e-93
EBV057122341120929KSHV0398551486974 1e-86
EBV058123692122328KSHV0388421785551 8e-53
EBV059124938125915KSHV0368291781979 2e-60
EBV060124938130351KSHV0307865877603 1e-128
EBV061124939123941KSHV0358291683899 5e-40
EBV062126873125863KSHV0348100281940 9e-41
EBV063128374126851KSHV0337964581009 2e-08
EBV064129021128344KSHV0327900479678 8e-30
EBV067133305132400KSHV0277517476091 1e-82
EBV068137466133321KSHV0257101875148 0.0
EBV069137991139718KSHV0267101968761 1e-103
EBV070139642140916KSHV0246875767543 2e-48
EBV071143036140916KSHV0236535467546 4e-62
EBV072144860145606KSHV0226381462852 2e-30
EBV073144861143038KSHV0216362465366 2e-60
EBV074145416147128KSHV0206308461435 1e-98
EBV075147927149744KSHV0196072359062 1e-50
EBV076148707149744KSHV0196072359062 6e-09
EBV079156746153699KSHV0063960442642 0.0
EBV080159322156749KSHV0053694039477 1e-169
EBV081161678159312KSHV0043486936956 1e-130
EBV082164770161384KSHV0033145134852 0.0
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