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NBD1 | NBD2 | MSD1 | TM | EAA | MSD2 | TM | EAA | SBP1 | SBP2 | Domain | Subfamily | Function |
|
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TP0035 |
|
TP0036 |
7
|
-2
|
|
|
|
TP0034 |
|
3
|
8
|
Zn/Mn? |
TP0581 |
|
TP0580 |
6
|
-2
|
TP0582 |
6
|
-2
|
TP0585 |
|
2
|
9
|
peptide? |
TP0142 |
|
TP0143 |
9
|
-2
|
|
|
|
TP0144 |
|
3
|
5a | Thiamine ? |
TP0164 |
|
TP0165 |
5
|
-2
|
TP0166 |
6
|
-2
|
TP0163 |
|
2
|
8
|
manganese? |
TP0300 | TP0300 | TP0301 |
9
|
-1
|
TP0302 |
7
|
-2
|
TP0298 |
|
4
|
1
|
galactosides? |
TP0321 | TP0321 | TP0322 |
9
|
-2
|
TP0323 |
8
|
-2
|
TP0319 |
|
4
|
1
|
galactosides? |
TP0652 |
|
TP0653 |
7
|
0
|
TP0654 |
7
|
0
|
TP0655 |
|
2
|
5a | Spermidine / Putrescine |
|
|
|
|
|
|
|
|
|
|
|
|
|
TP0685 | TP0685 | TP0686 |
7
|
-2
|
|
|
|
TP0684 |
|
9
|
1
|
D-Galactose/D-Ribose? |
|
|
|
|
|
|
|
|
TP0545 |
|
|
1
|
D-galactose/ D-glucose |
|
|
|
|
|
|
|
|
|
|
|
|
|
TP0804 |
|
|
|
|
|
|
|
TP0737 |
|
|
5a | oligo-saccharide |
|
|
TP0075 |
6
|
-1
|
TP0076 |
5
|
0
|
TP0074 |
|
|
5a | Maltose/ sn-Glycerol-3-phosphate |
|
|
|
|
|
|
|
|
|
|
|
|
|
TP0120 |
|
TP0119 |
4
|
0
|
|
|
|
TP0821??? |
|
3
|
2 or 4 | peptide or amino acid |
|
|
|
|
|
|
|
|
TP0308 | TP0309 |
|
4
|
amino acid?? |
|
||||||||||||
TP0964 |
|
TP0963 |
4
|
-2
|
TP0962 |
5
|
-2
|
|
|
2
|
9
|
antibiotic |
TP0227 |
|
TP0226 |
5
|
-2
|
|
|
|
|
|
3
|
12
|
? |
TP0611 |
|
|
|
|
|
|
|
|
|
|
None | ? |
TP0838 | TP0838 | TP0840??? |
7
|
-2
|
|
|
|
|
|
9
|
3
|
macrolide? |
TP0881 |
|
TP0880 |
7
|
-2
|
|
|
|
|
|
3
|
7a | Na+ |
TP0786 |
|
|
|
|
|
|
|
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|
|
The ABC transporters are split into importers and exporters. For each ABC transporter, the nucleotide-binding domains (NBD1 and NBD2), the membrane-spanning domains (MSD1 and MSD2), and the solute-binding proteins (SBP1 and SBP2) are reported. The functions were assigned based on the similarity searches against Genbank.
TM: Transmembrane segments predicted with the PHD htm program
EAA motifs predicted with the Pattern Search.
Blue: Newly uncovered fusion protein.
Red: Newly uncovered ABC transporter components