|
|
|
|
|
|
|
|||||||
| NBD1 | NBD2 | MSD1 | TM | EAA | MSD2 | TM | EAA | SBP1 | SBP2 | Domain | Subfamily | Function |
|
|
||||||||||||
| CT068 |
|
CT069 |
7
|
-2
|
CT070 |
10
|
-2
|
CT067 |
|
2
|
8
|
manganese? |
| CT130 |
|
CT129 |
4
|
0
|
|
|
|
CT381 |
|
3
|
4
|
amino acid |
|
|
|
|
|
|
|
|
|
CT486 |
|
|
4
|
glutamine |
| CT180 |
|
CT854 |
3
|
|
|
|
|
|
|
3
|
5c | nitrate? |
| CT201 | CT202 | CT200 |
6
|
-2
|
CT199 |
6
|
-2
|
CT198 |
|
1
|
2
|
oligopeptide |
| CT689 | CT690 |
|
|
|
|
|
|
|
|
1
|
2
|
|
|
|
|
CT479 |
5
|
-2
|
CT478 |
5
|
-2
|
CT480 |
|
|
2
|
oligopeptide? |
|
|
|
|
|
|
|
|
|
CT175 |
|
|
2
|
dipeptide? |
| CT416 |
|
CT417 |
7
|
-2
|
|
|
|
CT415 |
|
3
|
8
|
Zn/Mn? |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
||||||||||||
| CT152 |
|
CT151 |
4
|
-2
|
|
|
|
|
|
3
|
9
|
antibiotic |
| CT264 |
|
CT264 |
4
|
-2
|
|
|
|
|
|
5
|
6
|
multidrug |
| CT685 |
|
CT684 |
|
-2
|
CT686 |
1
|
-2
|
|
|
2
|
None | ? |
| CT348 | CT348 |
|
|
|
|
|
|
|
|
|
3
|
macrolide? |
| CT653 |
|
|
|
|
|
|
|
|
|
|
7c | antibiotic |
The ABC transporters are split into importers and exporters. For each ABC transporter, the nucleotide-binding domains (NBD1 and NBD2), the membrane-spanning domains (MSD1 and MSD2), and the solute-binding proteins (SBP1 and SBP2) are reported. The functions were assigned based on the similarity searches against Genbank.
TM: Transmembrane segments predicted with the PHD htm program
EAA motifs predicted with the Pattern Search.
Blue: Newly uncovered fusion protein.
Red: Newly uncovered ABC transporter components