NBD protein | MSD protein | SBP Protein | DomainType | Function | |||||||
NBD1 | NBD2 | MSD1 | TM | EAA | MSD2 | TM | EAA | SBP1 | SBP2 | ||
A. Importers | |||||||||||
SMu0235 | SMu0234 | SMu0233 | 5 | -2 | SMu0232 | 4 | -1 | SMu0231 | 1 | oligopeptide | |
SMu0741 | amino acid | ||||||||||
SMu1781 | sugar | ||||||||||
SMu1428 | SMu1426 | 8 | 0 | SMu1427 | 5 | 0 | SMu1425 | 2 | maltose | ||
SMu0805 | SMu0802 | 6 | 0 | SMu0803 | 5 | -1 | SMu0801 | 2 | melibiose/raffinose | ||
SMu1762 | SMu1761 | 3 | -2 | SMu1765 | SMu1764 | 3 | ??? | ||||
SMu0739 | aspartate | ||||||||||
SMu0884 | SMu0886 | 5 | -1 | SMu0885 | 5 | -1 | SMu0887 | 2 | spermidine/putresceine | ||
SMu0849 | SMu0848 | 4 | 0 | SMu0847 | 3 | 0 | SMu0846 | 2 | glutamine/truncation | ||
SMu0218 | SMu0219 | 3 | 0 | SMu0219 | 3 | glutamine? | |||||
SMu1003 | SMu1002 | 6 | -1 | 3 | choline???? | ||||||
SMu1380 | SMu1382 | 4 | 0 | SMu1383 | 4 | 0 | SMu1381 | 2 | amino acid | ||
SMu1079 | SMu1080 | 4 | -1 | SMu1078 | 3 | amino acid | |||||
SMu1037 | SMu1036 | SMu1038 | 5 | 0 | SMu1039 | 5 | -1 | SMu1040 | 1 | phosphate | |
SMu0517 | SMu0516 | 3 | 0 | 3 | Glutamine | ||||||
SMu0731 | SMu0732 | 5 | 0 | SMu0732 | 3 | amino acid | |||||
SMu1111 | 4 | 0 | SMu1112 | amino acid | |||||||
SMu1518 | SMu1517 | SMu1520 | 7 | -2 | SMu1519 | 7 | -2 | SMu1521 | 1 | branched chain amino acids | |
SMu1210 | SMu1209 | 4 | -1 | 3 | FtsEX cell division | ||||||
SMu1023 | SMu1023 | SMu1022 | 8 | -2 | SMu1021 | 8 | -2 | SMu1024 | 4 | galactose | |
SMu0907 | SMu0905 | 9 | -2 | SMu0906 | 8 | -2 | SMu0908 | 2 | iron (III) | ||
SMu0164 | SMu0165 | 9 | SMu0166 | 3 | manganese ion | ||||||
SMu0418 | SMu0417 | 3 | 0 | SMu0416 | 3 | amino acid? | |||||
SMu1811 | SMu1810 | 8 | SMu1189 | 3 | zinc ion | ||||||
SMu0594 | SMu0595 | 6 | 0 | SMu0593 | 3 | anion | |||||
SMu1920 | SMu1921 | 5 | -1 | SMu1923 | 6 | -1 | SMu1922 | 2 | glycine betaine/carnitine/choline | ||
SMu1316 | SMu1317 | 7 | -2 | 3 | Ribose??? | ||||||
B.Exporters | |||||||||||
SMu1065 | SMu1064 | SMu1065 | 6 | -2 | SMu1064 | 6 | -2 | 6 | drug efflux | ||
SMu0476 | SMu0475 | SMu0476 | 5 | -2 | SMu0475 | 6 | -2 | 6 | ??? | ||
SMu1093 | SMu1094 | 6 | -2 | 3 | ??? | ||||||
SMu0786 | SMu0787 | 4 | -2 | 3 | ??? | ||||||
SMu0916 | SMu0917 | 10 | -2 | SMu0917 | 3 | ??? | |||||
SMu0729 | SMu0729 | ??? | |||||||||
SMu0986 | SMu0987 | SMu0986 | 6 | -2 | SMu0987 | 6 | -2 | 6 | ??? | ||
SMu0950 | SMu0951 | 13 | -2 | SMu0951 | 8 | ??? | |||||
SMu1068 | SMu1067 | 8 | -1 | 3 | ??? | ||||||
SMu0596 | SMu0598 | 4 | SMu0599 | 5 | -2 | 3 | ??? | ||||
SMu1288 | SMu1288 | 4 | -2 | 5 | ??? | ||||||
SMu1410 | SMu1409 | 5 | 3 | efflux | |||||||
SMu1950 | SMu1949 | SMu1948 | 6 | 7 | ??? | ||||||
SMu0971 | SMu0970 | 6 | 0 | 3 | glycine betaine | ||||||
SMu1246 | SMu1245 | 7 | -1 | 3 | ??? | ||||||
SMu1231 | SMu1230 | 7 | -1 | 3 | ??? | ||||||
SMu0944 | SMu0945 | 6 | -2 | 3 | ??? | ||||||
SMu1751 | SMu1752 | 8 | -1 | 3 | ??? | ||||||
SMu1710 | SMu1710 | 7 | -2 | 5 | ??? | ||||||
SMu0335 | SMu0336 | 6 | -2 | 3 | ??? | ||||||
SMu0024 | ??? | ||||||||||
SMu1545 | SMu1544 | 6 | -2 | 3 | ??? | ||||||
SMu0666 | SMu0667 | 5 | 3 | ??? | |||||||
SMu0752 | SMu0751 | 5 | 3 | ??? | |||||||
SMu1202 | SMu1203 | 7 | 3 | ??? | |||||||
SMu1221 | 11 | 0 | SMu1221 | multidrug resistance | |||||||
SMu0825 | SMu0824 | SMu0825 | 5 | -2 | SMu0824 | 6 | -2 | 6 | drug efflux | ||
SMu0823 | SMu0823 | SMu0826 | 6 | 9 | ??? | ||||||
SMu0836 | SMu0837 | SMu0836 | 4 | -2 | SMu0837 | 5 | -2 | 6 | ??? | ||
SMu0374 | SMu0375 | 8 | -2 | 3 | ??? | ||||||
SMu1001 | SMu1000 | 4 | -2 | 3 | ??? | ||||||
SMu0390 | SMu0391 | 4 | -2 | 3 | ??? | ||||||
SMu1959 | SMu1959 | SMu1960 | 12 | -2 | SMu1960 | 11 | ??? | ||||
SMu1649 | SMu1648 | 6 | -1 | SMu1647 | 6 | 2 | ??? | ||||
SMu1306 | SMu1306 | ??? | |||||||||
SMu0224 | ??? | ||||||||||
SMu0976 | SMu0975 | 6 | 3 | ??? | |||||||
SMu1050 | SMu1051 | 6 | -2 | SMu1052 | 5 | 2 | ??? | ||||
SMu1757 | SMu1757 | SMu1756 | 5 | SMu1758 | 4 | 4 | ??? | ||||
SMu0216 | SMu0215 | 5 | 3 | ??? | |||||||
SMu0258 | SMu0258 | 6 | -1 | SMu0259 | 5 | peptide toxin efflux | |||||
SMu1724 | SMu1724 | 6 | -2 | SMu1726 | 5 | peptide toxin efflux |
The ABC transporters are split into importers and exporters. For each ABC transporter, the nucleotide-binding domains (NBD1 and NBD2), the membrane-spanning domains (MSD1 and MSD2), and the solute-binding proteins (SBP1 and SBP2) are reported. The functions were assigned based on the similarity searches against Genbank.
TM: Transmembrane segments predicted with the Psort program
EAA motifs predicted with the Pattern Search.