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tRNA Table for Mycoplasma genitalium


Mycoplasma genitalium appears to possess no fewer than 36 transfer RNA genes as determined by the tRNAscan-SE 1.1 algorithm of T.M.Lowe and S.R.Eddy (Nucl. Acids Res. 25: 955-964, 1997). This differs from the 29 species reported for M. capricolum (H. Inokuchi and F. Yamao, In "TRNA Structure, Biosynthesis, and Function" edited by D. Soll and U. RajBhandary, pp. 17-30, ASM Press, Washi ngton D.C., 1995). and, more importantly, the 33 genes inferred for genitalium by Fraser et al. on the basis of similarities to M. pneumoniae (Science 270: 397-403, 1995). These tRNAs are potentially modified by a minimum of 4 enzymes and charged by at least 19 aminoacyl-tRNA synthetases. Genitalium's tRNA genes tend to be clustered, yet no tRNA genes were associated with the 16S-23S rRNA spacer region (see accompanying map).

tRNA ID IGS ID Start Stop
tRNA-Ala-1IGR101537015295
tRNA-Arg-1IGR161266422266498
tRNA-Arg-2IGR185306615306689
tRNA-Arg-3IGR190315375315299
tRNA-Arg-4IGR284480315480240
tRNA-Asn-1IGR239403700403626
tRNA-Asp-1IGR157257741257814
tRNA-Cys-1IGR157257157257233
tRNA-Gln-1IGR208344245344171
tRNA-Glu-1IGR239403619403543
tRNA-Gly-1IGR184304963304890
tRNA-Gly-2IGR208343956343883
tRNA-His-1IGR260445078445153
tRNA-Ile-1IGR101545215376
tRNA-Leu-1IGR208344049343964
tRNA-Leu-2IGR239403217403133
tRNA-Leu-3IGR261446265446178
tRNA-Leu-4IGR263448783448864
tRNA-Lys-1IGR208344124344050
tRNA-Lys-2IGR239403298403223
tRNA-Met-1IGR157257348257424
tRNA-Met-2IGR157257444257520
tRNA-Met-3IGR157257663257739
tRNA-Phe-1IGR157257817257892
tRNA-Pro-1IGR157257268257344
tRNA-Ser-1IGR427048270394
tRNA-Ser-2IGR157257558257649
tRNA-Ser-3IGR238399867399957
tRNA-Ser-4IGR238399959400047
tRNA-Thr-1IGR147240285240212
tRNA-Thr-2IGR239403380403305
tRNA-Thr-3IGR239403540403466
tRNA-Trp-1IGR185306738306811
tRNA-Trp-2IGR213349127349201
tRNA-Tyr-1IGR208344336344250
tRNA-Val-1IGR239403457403382

Total Records: 36
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