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tRNA Table for Haemophilus ducreyi


Haemophilus ducreyi appears to possess no fewer than 48 transfer RNA genes as determined by the tRNAscan-SE 1.1 program of T.M. Lowe and S.R. Eddy (Nucl. Acids Res. 25: 955-964,1997). These tRNAs are potentially modified by a minimum of 9 enzymes and charged by at least 24 aminoacyl-tRNA synthetases.

In addition to the usual set of tRNAs, Haemophilus ducreyi contains a selenocysteine inserting tRNA. Selenocysteine inserting tRNAs require SelA, SelB and SelD for cotranslational insertion of selenocysteine into the peptide chain. All three of these genes have been identified in this genome.

tRNA ID IGS ID Start Stop
tRNA-Ala-1IGR111237012445
tRNA-Ala-2IGR223241882241957
tRNA-Ala-3IGR231256653256728
tRNA-Ala-4IGR561618467618542
tRNA-Arg-1IGR568631333631409
tRNA-Arg-2IGR805883103883027
tRNA-Arg-3IGR135215417361541660
tRNA-Asn-1IGR147216659761665901
tRNA-Asp-1IGR111618016256
tRNA-Asp-2IGR150161352161276
tRNA-Cys-1IGR118213403311340258
tRNA-Gln-1IGR295329968330042
tRNA-Glu-1IGR437490935491010
tRNA-Glu-2IGR135215396371539562
tRNA-Glu-3IGR140016044571604382
tRNA-Gly-1IGR424937249298
tRNA-Gly-2IGR639719027718952
tRNA-Gly-3IGR697768767768692
tRNA-Gly-4IGR118213404141340339
tRNA-His-1IGR135215416321541557
tRNA-Ile-1IGR111225012326
tRNA-Ile-2IGR223241762241838
tRNA-Ile-3IGR561618347618423
tRNA-Leu-1IGR295329855329939
tRNA-Leu-2IGR697768667768581
tRNA-Leu-3IGR93410405581040643
tRNA-Leu-4IGR119613585661358651
tRNA-Lys-1IGR697768527768452
tRNA-Lys-2IGR141916230661623141
tRNA-Met-1IGR295329773329849
tRNA-Met-2IGR891987829987905
tRNA-Met-3IGR107912008191200743
tRNA-Met-4IGR119413567891356865
tRNA-Phe-1IGR147216660571665982
tRNA-Pro-1IGR805883215883139
tRNA-Pro-2IGR135215415301541454
tRNA-SeC(p)-1IGR146816622491662339
tRNA-Ser-1IGR509570872570783
tRNA-Ser-2IGR568631172631265
tRNA-Ser-3IGR131815006241500535
tRNA-Thr-1IGR424929449219
tRNA-Thr-2IGR424962149546
tRNA-Trp-1IGR111629416369
tRNA-Tyr-1IGR424950849424
tRNA-Val-1IGR230254740254661
tRNA-Val-2IGR230254872254797
tRNA-Val-3IGR230254989254914
tRNA-Val-4IGR92310251491025073

Total Records: 48


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