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Repeat Table for Neisseria gonorrhoeae

Repeat Name Copy # Location Length Gene & Intergenic Id(s) Definitions-Comments
138  2.00 1354500,1356893
1559280,1561673
2393 NG1392 , NG1393 , IGR1140, IGR1141, NG1584 , NG1585 , IGR1292, IGR1293  adhesin MafB2
Neisseria-specific protein MafA2 adhesin
Neisseria-specific protein - adhesin MafA2
adhesin MafB2 
139  2.00 1075848,1077917
1585491,1587560
2069 NG1128 , NG1129 , NG1130 , NG1131 , IGR0913, IGR0914, NG1615 , NG1616 , NG1617 , NG1618 , IGR1318, IGR1319  conserved hypothetical protein, phage-related
hypothetical protein
hypothetical protein
hypothetical protein
conserved hypothetical protein (type I restriction enzyme related)
hypothetical protein
hypothetical protein
conserved hypothetical protein - putative phage origin 
140  2.00 1026277,1027706
1948950,1950379
1429 NG1067 , NG1068 , IGR0868.1, IGR0869, NG1971 , NG1972 , IGR1622, IGR1623  MafA adhesin - Neisseria specific
MafB adhesin - Neisseria specific
MafB adhesin
mafA adhesin 
141  2.00 459273,460681
1074405,1075813
1408 NG0467 , NG0468 , NG0469 , NG0470 , NG0471 , IGR0391, IGR0392, NG1124 , NG1125 , NG1126 , NG1127 , NG1128 , IGR0911, IGR0912  conserved hypothetical protein (possible phage origin)
hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein
Neisseria-specific protein, uncharacterized
hypothetical protein
hypothetical protein
hypothetical protein
conserved hypothetical protein, phage-related 
142  2.00 461151,462270
1072816,1073935
1119 NG0472 , NG0473 , NG0474 , NG0475 , IGR0394, IGR0395, NG1120 , NG1121 , NG1122 , NG1123 , IGR0908, IGR0909  hypothetical protein
conserved hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein 
143  2.00 1146933,1148039
1659027,1660133
1106 NG1200 , IGR0968, IGR0969, NG1702 , NG1703 , IGR1389  pilin gene inverting protein homolog PivNG
conserved hypothetical protein
pilin gene inverting protein homolog PivNG 
144  2.00 767994,768853
1146905,1147764
859 NG0773 , IGR0645, NG1199 , NG1200 , IGR0968  pilin gene inverting protein homolog PivNG
ATP dependent DNA helicase (HrpA)
pilin gene inverting protein homolog PivNG 
145  2.00 1074350,1075173
1588235,1589058
823 NG1124 , NG1125 , NG1126 , IGR0911, NG1620 , NG1621 , NG1622 , IGR1321  Neisseria-specific protein, uncharacterized
hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein 
146  2.00 458182,458988
1076098,1076904
806 NG0465 , NG0466 , NG0467 , IGR0389, IGR0390, NG1128 , NG1129 , NG1130 , IGR0913, IGR0914  hypothetical protein
hypothetical protein
conserved hypothetical protein (possible phage origin)
conserved hypothetical protein, phage-related
hypothetical protein
hypothetical protein 
147  2.00 465526,466313
1068638,1069425
787 NG0482 , NG0483 , NG0484 , IGR0401, NG1111 , NG1112 , IGR0900, IGR0901  hypothetical protein
hypothetical protein
hypothetical protein
conserved hypothetical protein
hypothetical protein 
148  2.00 1073684,1074352
1589055,1589723
668 NG1123 , NG1124 , IGR0909, IGR0910, NG1622 , NG1623 , IGR1322, IGR1323  hypothetical protein
Neisseria-specific protein, uncharacterized
hypothetical protein
hypothetical protein 
149  2.00 1075202,1075847
1587561,1588206
645 NG1126 , NG1127 , NG1128 , IGR0912, NG1618 , NG1619 , NG1620 , IGR1320  hypothetical protein
hypothetical protein
conserved hypothetical protein, phage-related
conserved hypothetical protein - putative phage origin
hypothetical protein
hypothetical protein 
150  2.00 1080238,1080867
1216253,1216882
629 NG1137 , NG1262   pilin gene inverting protein homolog PivNG
pilin gene inverting protein homolog PivNG 
151  2.00 768247,768853
1215837,1216443
606 NG0773 , IGR0645, NG1262 , IGR1027  pilin gene inverting protein homolog PivNG
pilin gene inverting protein homolog PivNG 
152  2.00 1064589,1065195
1598311,1598917
606 NG1105 , NG1106 , IGR0896, NG1639 , NG1640 , IGR1336  hypothetical protein
hypothetical protein
conserved hypothetical protein
hypothetical protein 
153  2.00 467490,468083
1066802,1067395
593 NG0485 , NG1110   replicative DNA helicase
replicative DNA helicase, phage origin 
154  2.00 1215865,1216443
1659555,1660133
578 NG1262 , IGR1027, NG1703 , IGR1389  pilin gene inverting protein homolog PivNG
pilin gene inverting protein homolog PivNG 
155  2.00 154773,155343
746880,747450
570 NG0146.1 , IGR0120.1, NG0750 , IGR0625.1  IS1016-related transposase
putative IS1016 transposase 
156  2.00 466519,467061
1067824,1068366
542 NG0484 , NG0485 , NG1110 , NG1111   hypothetical protein
replicative DNA helicase
replicative DNA helicase, phage origin
conserved hypothetical protein 
157  2.00 1426902,1427440
1532253,1532791
538 NG1461 , NG1462 , IGR1193, IGR1194, NG1556 , NG1557 , IGR1269.1, IGR1270  hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein 
158  2.00 155216,155732
1419199,1419715
516 NG0146.2 , IGR0120.1, IGR1186.1  transposase 
159  2.00 468742,469250
1065635,1066143
508 NG0487 , IGR0404, NG1108 , IGR0897  hypothetical protein
hypothetical protein 
160  2.00 1103493,1103997
1659051,1659555
504 NG1164 , IGR0940.2, NG1702 , NG1703   pilin gene inverting protein
conserved hypothetical protein
pilin gene inverting protein homolog PivNG 
161  2.00 768375,768853
1102886,1103364
478 NG0773 , IGR0645, NG1163.1 , IGR0940  pilin gene inverting protein homolog PivNG
pilin gene inverting protein 
162  2.00 1148787,1149265
1541129,1541607
478 NG1202 , IGR0970.1, NG1568.1 , IGR1282  transposase
transposase 
163  2.00 465055,465525
1069426,1069896
470 NG0480 , NG0481 , NG0482 , IGR0399, IGR0400, NG1113 , NG1114 , IGR0901, IGR0902  hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein 
164  2.00 468288,468741
1066144,1066597
453 NG0485 , NG0486 , NG0487 , IGR0402, IGR0403, NG1108 , NG1109 , NG1110 , IGR0898, IGR0899  replicative DNA helicase
hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein
replicative DNA helicase, phage origin 
165  2.00 78184,78636
187633,188085
452 NG0072.1 , IGR0058.1, NG0186.1 , IGR0151  possible transposase
transposase fragment of IS1016 
166  2.00 1102914,1103364
1659683,1660133
450 NG1163.1 , IGR0940, NG1703 , IGR1389  pilin gene inverting protein
pilin gene inverting protein homolog PivNG 
167  2.00 578174,578610
1148604,1149040
436 NG0591 , IGR0494.1, NG1201 , NG1202 , IGR0970  IS1016 Transposase
Neisseria-specific protein, uncharacterized
transposase 
168  2.00 1481099,1481524
2037121,2037546
425 NG1513 , NG1512.1 , IGR1237.1, IGR1702  outer membrane opacity protein
pilin protein 
169  2.00 864896,865313
1419199,1419616
417 NG0883 , NG0884 , IGR0734, IGR1186.1  hypothetical protein
probable transposase fragment - Neisseria specific 
170  2.00 768438,768853
1599248,1599663
415 NG0773 , IGR0645, NG1641 , IGR1337  pilin gene inverting protein homolog PivNG
pilin gene inverting protein homolog PivNG 
171  2.00 467062,467475
1067410,1067823
413 NG0485 , NG1110   replicative DNA helicase
replicative DNA helicase, phage origin 
172  2.00 1541163,1541564
1871542,1871943
401 NG1568.1 , IGR1282, NG1901.1 , IGR1560.1  transposase
transposase related 
173  2.00 1065787,1066183
1597321,1597717
396 NG1108 , IGR0898, NG1638 , IGR1334  hypothetical protein
hypothetical protein 
174  2.00 1599276,1599663
1659746,1660133
387 NG1641 , IGR1337, NG1703 , IGR1389  pilin gene inverting protein homolog PivNG
pilin gene inverting protein homolog PivNG 
175  2.00 1080493,1080867
1599664,1600038
374 NG1137 , NG1641   pilin gene inverting protein homolog PivNG
pilin gene inverting protein homolog PivNG 
176  2.00 1065419,1065786
1597718,1598085
367 NG1107 , NG1108 , IGR0897, NG1638 , NG1639 , IGR1335  hypothetical protein
hypothetical protein
hypothetical protein
conserved hypothetical protein 
177  2.00 1025795,1026155
1715163,1715523
360 NG1066 , IGR0868, IGR0868.1, NG1754 , IGR1429  transposase
IS1016 fragment (C-terminus of IS1016 transposases); MfaI plasmid maintenance protein? 
178  2.00 1600011,1600363
1659046,1659398
352 NG1641 , IGR1338, NG1702 , NG1703   pilin gene inverting protein homolog PivNG
conserved hypothetical protein
pilin gene inverting protein homolog PivNG 
179  2.00 204815,205166
1376134,1376485
351 NG0201 , IGR0164, NG1412 , IGR1151  IS1016 transposase
IS1016 transposase 
180  3.00 74807,75142
1481925,1482260
2036419,2036744
335 NG0070 , NG1513 , IGR1702  outer membrane opacity protein B (opaB)
outer membrane opacity protein 
181  2.00 1097788,1098119
1376507,1376838
331 NG1157 , IGR0934, NG1412 , IGR1152  IS1016 transposase
IS1016 transposase 
182  2.00 187829,188154
1148625,1148950
325 NG0186.1 , IGR0151.1, NG1201 , NG1202 , IGR0970  transposase fragment of IS1016
Neisseria-specific protein, uncharacterized
transposase 
183  2.00 1216628,1216947
1659051,1659370
319 NG1262 , IGR1028, NG1702 , NG1703   pilin gene inverting protein homolog PivNG
conserved hypothetical protein
pilin gene inverting protein homolog PivNG 
184  4.00 38563,38879
155416,155732
864997,865313
976483,976799
316 IGR0033, NG0146.2 , IGR0120.1, NG0883 , NG0884 , IGR0734, NG1006 , IGR0830  transposase
hypothetical protein
probable transposase fragment - Neisseria specific
Neisseria-specific protein, possible transposase 



Copy #is the number of repeat units
Location is given in genome coordinates
Length is the size of the consensus repeat unit in nucleotides
Gene & Intergenic Id(s) are the ids of the gene and intergenic space records in which the repeat is located
Definitions-Comments are the definition lines from the genes and the comments from the intergenic space records in the previous columns


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