Basic Search | Intermediate Search | Advanced SQL Search | Gene Image Map| Home

Repeat Table for Neisseria gonorrhoeae

Repeat Name Repeat Type Copy # Location Length Gene & Intergenic Id(s) Definitions-Comments
1  tandem 4.20 13411,13456 11 NG0015   Neisseria-specific protein, uncharacterized 
2  tandem 2.10 18283,18307 12 NG0021   iron receptor; TonB-dependent receptor protein 
3  tandem 1.90 21170,21209 20 NG0024   hypothetical protein 
4  tandem 1.90 30496,30535 20 NG0034   fructose-1,6-bisphosphate aldolase 
5  tandem 4.10 48332,49471 281 NG0049.1 , NG0049.2 , IGR0040, IGR0040.1, IGR0040.2  hypothetical protein
hypothetical protein 
6  tandem 3.40 56098,57057 280 IGR0044   
7  tandem 13.80 69754,69822 5 IGR0053   
8  tandem 9.80 75510,75558 5 NG0070   outer membrane opacity protein B (opaB) 
9  tandem 3.80 76175,76224 13 IGR0056   
10  tandem 1.90 138380,138408 15 NG0127   tRNA processing exoribonuclease BN 
11  tandem 2.70 139721,139761 15 NG0129   possible aluminum resistance protein (YbaX) 
12  tandem 3.10 171739,171775 12 NG0168   periplasmic binding protein MntC, possible ABC solute binding protein 
13  tandem 3.00 194581,195057 159 NG0192 , NG0195 , IGR0157  spermidine/putrescine ABC transporter, ATP-binding protein
spermidine/putrescine ABC transporter, permease protein 
14  tandem 4.60 210383,210414 7 NG0207   glycosyl transferase 
15  tandem 1.90 307027,307057 16 IGR0258   
16  tandem 12.40 317722,317808 7 IGR0265   
17  tandem 21.40 358510,358616 5 NG0366   hypothetical protein 
18  tandem 2.80 399762,399794 12 NG0406   DNA restriction and modification endonuclease 
19  tandem 2.30 435789,435813 11 NG0441   ribose-phosphate pyrophosphokinase (phosphoribosyl pyrophosphate synthetase) 
20  tandem 2.30 460736,460763 12 IGR0393   
21  tandem 20.60 461420,461666 12 NG0473 , IGR0394  conserved hypothetical protein 
22  tandem 40.80 461422,461666 6 NG0473   conserved hypothetical protein 
23  tandem 5.40 466312,466429 22 NG0484   hypothetical protein 
24  tandem 2.50 466293,466454 66 NG0484   hypothetical protein 
25  tandem 2.10 466463,466487 12 NG0484   hypothetical protein 
26  tandem 6.80 479586,479649 9 NG0499   hypothetical protein 
27  tandem 2.50 479594,479668 30 NG0499   hypothetical protein 
28  tandem 12.80 518019,518082 5 NG0545   site-specific DNA-methyltransferase; type III restriction-modification system methyltransferase, subunit mod 
29  tandem 2.20 545396,545454 27 NG0564   dihydrolipoamide S-acetyltransferase complex (E2 component of pyruvate dehydrogenase complex) 
30  tandem 2.90 554533,554575 15 NG0571   conserved hypothetical protein (possible membrane protein) 
31  tandem 37.20 631784,631932 4 NG0641   type III restriction/modification system modification methylase 
32  tandem 2.70 639364,639404 15 NG0650   ATP-dependent RNA helicase 
33  tandem 2.20 644536,644575 18 NG0655   exonuclease VII large subunit 
34  tandem 2.30 723525,723554 13 IGR0606   
35  tandem 2.10 805795,805832 18 IGR0673   
36  tandem 2.20 838721,838754 16 NG0851   cell-division protein FtsK 
37  tandem 2.10 863422,863446 12 IGR731.1   
38  tandem 16.80 924955,925038 5 IGR0785   
39  tandem 2.00 925883,925939 28 IGR0785   
40  tandem 12.40 952929,953114 15 NG0983   Neisseria-specific protein, probable proline-rich repeat protein 
41  tandem 5.20 952957,953113 30 NG0983   Neisseria-specific protein, probable proline-rich repeat protein 
42  tandem 2.90 983404,983455 18 NG1020   conserved hypothetical protein 
43  tandem 20.80 1000484,1000587 5 IGR0848   
44  tandem 2.20 1004801,1004827 12 IGR0852   
45  tandem 2.00 1032133,1032158 13 NG1074   conserved hypothetical protein 
46  tandem 2.00 1036104,1036160 28 NG1077   hypothetical protein 
47  tandem 2.00 1040014,1040039 13 IGR0879   
48  tandem 2.00 1040159,1040218 30 IGR0879   
49  tandem 2.40 1053995,1054023 12 NG1092   possible DNA methylase fragment 
50  tandem 2.10 1055263,1055309 22 NG1093   hypothetical protein 
51  tandem 2.10 1068399,1068423 12 NG1111   conserved hypothetical protein 
52  tandem 5.20 1068457,1068571 22 NG1111   conserved hypothetical protein 
53  tandem 3.50 1068432,1068659 66 NG1111   conserved hypothetical protein 
54  tandem 2.20 1068589,1068637 22 NG1111   conserved hypothetical protein 
55  tandem 40.80 1073421,1073665 6 NG1122   hypothetical protein 
56  tandem 2.30 1074324,1074351 12 NG1124   Neisseria-specific protein, uncharacterized 
57  tandem 2.00 1133958,1134130 87 NG1190   outer membrane protein precursor GNA2001 
58  tandem 2.00 1188140,1188180 20 IGR1003   
59  tandem 2.80 1198677,1198955 101 IGR1012   
60  tandem 11.80 1231522,1231580 5 IGR1041   
61  tandem 2.10 1356255,1356291 18 NG1393   Neisseria-specific protein MafA2 adhesin 
62  tandem 2.50 1396489,1396518 12 NG1433   ABC transporter, nitrate or taurine permease protein, possible MSD protein in ABC transport system 
63  tandem 2.00 1402374,1402409 18 NG1438   thiol:disulfide interchange protein DsbC 
64  tandem 20.80 1412273,1412355 4 IGR1180   
65  tandem 3.40 1425435,1426397 281 NG1458 , NG1459 , NG1460 , IGR1190, IGR1191, IGR1192  hypothetical protein
hypothetical protein
hypothetical protein 
66  tandem 2.00 1427527,1427623 48 NG1464 , IGR1194  outer membrane opacity protein; PII protein 
67  tandem 10.80 1428375,1428428 5 NG1464   outer membrane opacity protein; PII protein 
68  tandem 2.10 1465707,1465881 84 IGR1226   
69  tandem 2.10 1465426,1466202 365 NG1498 , NG1498.1 , IGR1225, IGR1226  hypothetical protein
conserved hypothetical protein 
70  tandem 12.80 1481471,1481534 5 NG1513   outer membrane opacity protein 
71  tandem 3.30 1482700,1482807 33 IGR1238   
72  tandem 1.90 1544090,1544128 20 NG1570   hypothetical protein (possible maltosephosphorylase) 
73  tandem 2.00 1544828,1544956 64 IGR1282.3   
74  tandem 2.30 1589057,1589084 12 NG1622   hypothetical protein 
75  tandem 1.90 1594092,1594126 18 IGR1330   
76  tandem 5.30 1595538,1595617 15 NG1634   conserved hypothetical protein - putative phage origin 
77  tandem 2.80 1595538,1595621 30 NG1634   conserved hypothetical protein - putative phage origin 
78  tandem 7.40 1595614,1595776 22 NG1634 , NG1635   conserved hypothetical protein - putative phage origin
hypothetical protein 
79  tandem 2.50 1595614,1595776 66 NG1634 , NG1635   conserved hypothetical protein - putative phage origin
hypothetical protein 
80  tandem 2.10 1595790,1595814 12 NG1635   hypothetical protein 
81  tandem 3.90 1712733,1712794 16 IGR1427   
82  tandem 2.20 1727027,1727052 12 IGR1438.1   
83  tandem 2.10 1729204,1729245 20 IGR1439   
84  tandem 15.60 1789800,1789908 7 IGR1484   
85  tandem 13.80 1830967,1831035 5 IGR1530   
86  tandem 2.00 1842980,1843435 228 NG1871 , NG1872 , NG1873 , IGR1537, IGR1538  polypeptide deformylase
hypothetical protein
conserved hypothetical protein 
87  tandem 2.00 1921078,1921107 15 NG1947   hypothetical protein 
88  tandem 2.10 1921168,1921199 15 NG1947   hypothetical protein 
89  tandem 2.30 1921216,1921283 30 NG1947   hypothetical protein 
90  tandem 1.90 1953815,1953839 13 NG1977   conserved hypothetical protein 
91  tandem 2.10 1958799,1958836 18 NG1984   Neisseria-specific protein, uncharacterized 
92  tandem 2.20 2013930,2013962 15 NG2042 , IGR1685  pilin silent gene cassette 
93  tandem 10.80 2037122,2037175 5 IGR1702   
94  tandem 2.20 2037598,2037630 15 IGR1702   
95  tandem 2.10 2039334,2039363 14 IGR1702.1   
96  tandem 2.00 2041192,2041237 23 IGR1703   
97  tandem 3.70 2058360,2058411 15 NG2078   ABC transporter, permease protein, MSD protein in ABC transport system 
98  tandem 2.80 2085602,2085635 12 NG2105   Cell envelope; Surface polysaccharides, lipopolysaccharides and antigensadhesin penetration protein; IgA-specific serine endopeptidase 
99  tandem 2.20 2091677,2091718 19 IGR1739   
100  direct 2.00 1081281,1085264
1103992,1107975
3983 NG1138 , NG1139 , NG1140 , NG1141 , IGR0918, IGR0919, IGR0920, NG1165 , NG1166 , NG1167 , IGR0940.2, IGR0941, IGR0942, IGR0943  conserved hypothetical protein (possible phage-related protein)
Neisseria-specific protein (possible integral membrane protein)
TspB-related protein
Neisseria-specific protein, uncharacterized
conserved hypothetical protein
Neisseria-specific protein, uncharacterized
TspB related protein 
101  direct 2.00 1260093,1263840
1651674,1655421
3747 NG1306 , IGR1063, IGR1385.1  hypothetical protein 
102  direct 2.00 1649321,1652633
1872473,1875785
3312 NG1698 , IGR1385.1, NG1903 , NG1902 , IGR1561  competence protein, DNA-binding
competence protein, DNA-binding
Neisseria-specific protein, uncharacterized 
103  direct 2.00 1083418,1086119
1219078,1221779
2701 NG1139 , NG1140 , NG1141 , NG1142 , NG1143 , IGR0920, IGR0921, IGR0922, IGR0923, NG1264 , NG1265 , NG1266 , NG1267 , NG1268 , IGR1030, IGR1031, IGR1032  Neisseria-specific protein (possible integral membrane protein)
TspB-related protein
Neisseria-specific protein, uncharacterized
Neisseria-specific protein, uncharacterized
Neisseria-specific protein (possible membrane protein)
Neisseria-specific protein, uncharacterized
TspB related protein
Neisseria-specific protein, uncharacterized
Neisseria-specific protein, uncharacterized
Neisseria-specific protein (possible integral membrane protein) 
104  direct 2.00 1257348,1259950
1872082,1874684
2602 NG1305 , IGR1062.1, IGR1063, NG1903 , NG1902 , IGR1560.1, IGR1561  competence protein, DNA-binding
competence protein, DNA-binding
Neisseria-specific protein, uncharacterized 
105  direct 2.00 1261431,1263842
1876164,1878575
2411 NG1306 , IGR1063, IGR1561  hypothetical protein 
106  direct 2.00 1108457,1110867
1221396,1223806
2410 NG1168 , NG1169 , NG1170 , NG1171 , NG1172 , NG1167.1 , IGR0943.1, IGR0944, IGR0945, IGR0946, IGR0947, NG1267 , NG1268 , NG1269 , NG1270 , NG1271 , NG1272 , IGR1032, IGR1033, IGR1034, IGR1035, IGR1036  Neisseria-specific protein, possible membrane protein
Neisseria-specific protein, uncharacterized
Neisseria-specific protein, uncharacterized
phage replication protein
hypothetical protein
Neisseria-specific protein, uncharacterized
Neisseria-specific protein, uncharacterized
Neisseria-specific protein (possible integral membrane protein)
Neisseria-specific protein, uncharacterized
Neisseria-specific protein, uncharacterized
probable phage protein
hypothetical protein 
107  direct 2.00 1653012,1655421
1876164,1878573
2409 IGR1385.1, IGR1561   
108  direct 2.00 1257739,1259950
1649321,1651532
2211 NG1305 , IGR1063, NG1698 , IGR1385.1  competence protein, DNA-binding
competence protein, DNA-binding 
109  direct 4.00 1119629,1121561
1261721,1263653
1653302,1655234
1876454,1878386
1932 NG1179 , IGR0950, NG1306 , IGR1063, IGR1385.1, IGR1561  Neisseria-specific protein, uncharacterized
hypothetical protein 
110  direct 2.00 1117636,1119560
1651314,1653238
1924 IGR0950, IGR1385.1   
111  direct 2.00 1106129,1107975
1219078,1220924
1846 NG1166 , NG1167 , IGR0942, IGR0943, NG1264 , NG1265 , NG1266 , IGR1030  Neisseria-specific protein, uncharacterized
TspB related protein
Neisseria-specific protein, uncharacterized
TspB related protein
Neisseria-specific protein, uncharacterized 
112  direct 2.00 1217602,1219332
1601019,1602749
1730 NG1263 , NG1264 , NG1265 , IGR1028, IGR1029, IGR1030, NG1642 , NG1643 , NG1644 , IGR1339, IGR1340  conserved hypothetical protein
Neisseria-specific protein, uncharacterized
TspB related protein
hypothetical protein
conserved hypothetical protein (possibly phage associated)
TspB protein 
113  direct 2.00 1117996,1119560
1260093,1261657
1564 IGR0950, IGR1063   
114  direct 2.00 1117636,1118955
1874466,1875785
1319 IGR0950, IGR1561   
115  direct 2.00 52520,53785
1887248,1888513
1265 NG0055 , IGR0043, NG1912 , IGR1569  pilus-associated protein
pilus associated protein 
116  direct 2.00 491768,492910
1606987,1608129
1142 NG0518 , NG0519 , NG0520 , IGR0430, IGR0431, NG1649 , NG1650 , IGR1345, IGR1346  hypothetical protein
Neisseria-specific protein, uncharacterized
hypothetical protein
conserved hypothetical protein
Neisseria-specific protein, uncharacterized 
117  direct 2.00 863594,864701
888361,889468
1107 NG0881 , NG0882 , IGR0732, IGR731.1, NG0909 , NG0910 , IGR0755, IGR0756  probable OrfB transposase
conserved hypothetical protein
IS150 transposase orfB protein
conserved hypothetical protein 
118  direct 2.00 1807697,1808792
1827216,1828311
1095 NG1842 , IGR1511, NG1858 , IGR1526  translation elongation factor TU
translation elongation factor Tu 
119  direct 2.00 38018,39079
252020,253081
1061 NG0041 , IGR0032, IGR0033, NG0252 , NG0253 , IGR0211, IGR0212  transposase fragment, undefined
Neisseria-specific protein, possible lipoprotein
transposase fragment, undefined 
120  direct 3.00 38021,39079
252023,253081
745949,747007
1058 NG0041 , IGR0032, IGR0033, NG0252 , NG0253 , IGR0211, IGR0212, NG0749 , IGR0625, IGR0625.1  transposase fragment, undefined
Neisseria-specific protein, possible lipoprotein
transposase fragment, undefined
putative IS1016 transposase 
121  direct 3.00 1115565,1116577
1257668,1258680
1872402,1873414
1012 NG1178 , IGR0950, NG1305 , IGR1063, NG1903 , NG1902 , IGR1561  competence protein, DNA-binding
competence protein, DNA-binding
competence protein, DNA-binding
Neisseria-specific protein, uncharacterized 
122  direct 2.00 1103678,1104651
1216628,1217601
973 NG1164 , IGR0940.2, NG1262 , IGR1028  pilin gene inverting protein
pilin gene inverting protein homolog PivNG 
123  direct 2.00 1260093,1261052
1874826,1875785
959 IGR1063, IGR1561   
124  direct 2.00 1115636,1116577
1649321,1650262
941 NG1178 , IGR0950, NG1698 , IGR1385.1  competence protein, DNA-binding
competence protein, DNA-binding 
125  direct 4.00 1082581,1083419
1105292,1106130
1218242,1219080
1601659,1602497
838 NG1138 , NG1139 , IGR0919, NG1165 , NG1166 , IGR0941, NG1263 , NG1264 , IGR1029, NG1643 , NG1644 , IGR1340  conserved hypothetical protein (possible phage-related protein)
Neisseria-specific protein (possible integral membrane protein)
conserved hypothetical protein
Neisseria-specific protein, uncharacterized
conserved hypothetical protein
Neisseria-specific protein, uncharacterized
conserved hypothetical protein (possibly phage associated)
TspB protein 
126  direct 2.00 767994,768825
1659302,1660133
831 NG0773 , IGR0645, NG1703 , IGR1389  pilin gene inverting protein homolog PivNG
pilin gene inverting protein homolog PivNG 
127  direct 4.00 1083753,1084581
1106464,1107292
1219413,1220241
1602834,1603662
828 NG1140 , NG1167 , NG1265 , NG1644   TspB-related protein
TspB related protein
TspB related protein
TspB protein 
128  direct 2.00 74739,75558
2036351,2037170
819 NG0070 , IGR0055, IGR1702  outer membrane opacity protein B (opaB) 
129  direct 2.00 925014,925823
1531358,1532167
809 IGR0785, IGR1269.1   
130  direct 2.00 458182,458988
1586504,1587310
806 NG0465 , NG0466 , NG0467 , IGR0389, IGR0390, NG1616 , NG1617 , NG1618 , IGR1318, IGR1319  hypothetical protein
hypothetical protein
conserved hypothetical protein (possible phage origin)
hypothetical protein
hypothetical protein
conserved hypothetical protein - putative phage origin 
131  direct 2.00 459913,460681
1588235,1589003
768 NG0469 , NG0470 , NG0471 , IGR0392, NG1620 , NG1621 , NG1622 , IGR1321  hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein 
132  direct 2.00 1284893,1285627
1418781,1419515
734 NG1326 , IGR1081, NG1453 , IGR1186.1  transposase fragment, undefined
transposase fragment, undefined 
133  direct 2.00 617535,618239
2064355,2065059
704 NG0628 , IGR0525, IGR0526, NG2087 , NG2086 , IGR1720  IS1016 transposase
IS1016 transposase
conserved hypothetical protein (possible adhesin) 
134  direct 2.00 976311,976994
1285139,1285822
683 NG1006 , NG1007 , IGR0830, NG1326 , NG1327 , IGR1081  Neisseria-specific protein, possible transposase
conserved hypothetical protein
transposase fragment, undefined
Neisseria-specific protein, uncharacterized 
135  direct 2.00 1081281,1081940
1216942,1217601
659 IGR0918, IGR1028   
136  direct 4.00 1081941,1082580
1104652,1105291
1217602,1218241
1601019,1601658
639 NG1138 , IGR0918, NG1165 , IGR0940.2, NG1263 , IGR1028, NG1642 , NG1643 , IGR1339  conserved hypothetical protein (possible phage-related protein)
conserved hypothetical protein
conserved hypothetical protein
hypothetical protein
conserved hypothetical protein (possibly phage associated) 
137  direct 2.00 459273,459884
1587595,1588206
611 NG0467 , NG0468 , NG0469 , IGR0391, NG1618 , NG1619 , NG1620 , IGR1320  conserved hypothetical protein (possible phage origin)
hypothetical protein
hypothetical protein
conserved hypothetical protein - putative phage origin
hypothetical protein
hypothetical protein 
138  inverse 2.00 1354500,1356893
1559280,1561673
2393 NG1392 , NG1393 , IGR1140, IGR1141, NG1584 , NG1585 , IGR1292, IGR1293  adhesin MafB2
Neisseria-specific protein MafA2 adhesin
Neisseria-specific protein - adhesin MafA2
adhesin MafB2 
139  inverse 2.00 1075848,1077917
1585491,1587560
2069 NG1128 , NG1129 , NG1130 , NG1131 , IGR0913, IGR0914, NG1615 , NG1616 , NG1617 , NG1618 , IGR1318, IGR1319  conserved hypothetical protein, phage-related
hypothetical protein
hypothetical protein
hypothetical protein
conserved hypothetical protein (type I restriction enzyme related)
hypothetical protein
hypothetical protein
conserved hypothetical protein - putative phage origin 
140  inverse 2.00 1026277,1027706
1948950,1950379
1429 NG1067 , NG1068 , IGR0868.1, IGR0869, NG1971 , NG1972 , IGR1622, IGR1623  MafA adhesin - Neisseria specific
MafB adhesin - Neisseria specific
MafB adhesin
mafA adhesin 
141  inverse 2.00 459273,460681
1074405,1075813
1408 NG0467 , NG0468 , NG0469 , NG0470 , NG0471 , IGR0391, IGR0392, NG1124 , NG1125 , NG1126 , NG1127 , NG1128 , IGR0911, IGR0912  conserved hypothetical protein (possible phage origin)
hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein
Neisseria-specific protein, uncharacterized
hypothetical protein
hypothetical protein
hypothetical protein
conserved hypothetical protein, phage-related 
142  inverse 2.00 461151,462270
1072816,1073935
1119 NG0472 , NG0473 , NG0474 , NG0475 , IGR0394, IGR0395, NG1120 , NG1121 , NG1122 , NG1123 , IGR0908, IGR0909  hypothetical protein
conserved hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein 
143  inverse 2.00 1146933,1148039
1659027,1660133
1106 NG1200 , IGR0968, IGR0969, NG1702 , NG1703 , IGR1389  pilin gene inverting protein homolog PivNG
conserved hypothetical protein
pilin gene inverting protein homolog PivNG 
144  inverse 2.00 767994,768853
1146905,1147764
859 NG0773 , IGR0645, NG1199 , NG1200 , IGR0968  pilin gene inverting protein homolog PivNG
ATP dependent DNA helicase (HrpA)
pilin gene inverting protein homolog PivNG 
145  inverse 2.00 1074350,1075173
1588235,1589058
823 NG1124 , NG1125 , NG1126 , IGR0911, NG1620 , NG1621 , NG1622 , IGR1321  Neisseria-specific protein, uncharacterized
hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein 
146  inverse 2.00 458182,458988
1076098,1076904
806 NG0465 , NG0466 , NG0467 , IGR0389, IGR0390, NG1128 , NG1129 , NG1130 , IGR0913, IGR0914  hypothetical protein
hypothetical protein
conserved hypothetical protein (possible phage origin)
conserved hypothetical protein, phage-related
hypothetical protein
hypothetical protein 
147  inverse 2.00 465526,466313
1068638,1069425
787 NG0482 , NG0483 , NG0484 , IGR0401, NG1111 , NG1112 , IGR0900, IGR0901  hypothetical protein
hypothetical protein
hypothetical protein
conserved hypothetical protein
hypothetical protein 
148  inverse 2.00 1073684,1074352
1589055,1589723
668 NG1123 , NG1124 , IGR0909, IGR0910, NG1622 , NG1623 , IGR1322, IGR1323  hypothetical protein
Neisseria-specific protein, uncharacterized
hypothetical protein
hypothetical protein 
149  inverse 2.00 1075202,1075847
1587561,1588206
645 NG1126 , NG1127 , NG1128 , IGR0912, NG1618 , NG1619 , NG1620 , IGR1320  hypothetical protein
hypothetical protein
conserved hypothetical protein, phage-related
conserved hypothetical protein - putative phage origin
hypothetical protein
hypothetical protein 
150  inverse 2.00 1080238,1080867
1216253,1216882
629 NG1137 , NG1262   pilin gene inverting protein homolog PivNG
pilin gene inverting protein homolog PivNG 
151  inverse 2.00 768247,768853
1215837,1216443
606 NG0773 , IGR0645, NG1262 , IGR1027  pilin gene inverting protein homolog PivNG
pilin gene inverting protein homolog PivNG 
152  inverse 2.00 1064589,1065195
1598311,1598917
606 NG1105 , NG1106 , IGR0896, NG1639 , NG1640 , IGR1336  hypothetical protein
hypothetical protein
conserved hypothetical protein
hypothetical protein 
153  inverse 2.00 467490,468083
1066802,1067395
593 NG0485 , NG1110   replicative DNA helicase
replicative DNA helicase, phage origin 
154  inverse 2.00 1215865,1216443
1659555,1660133
578 NG1262 , IGR1027, NG1703 , IGR1389  pilin gene inverting protein homolog PivNG
pilin gene inverting protein homolog PivNG 
155  inverse 2.00 154773,155343
746880,747450
570 NG0146.1 , IGR0120.1, NG0750 , IGR0625.1  IS1016-related transposase
putative IS1016 transposase 
156  inverse 2.00 466519,467061
1067824,1068366
542 NG0484 , NG0485 , NG1110 , NG1111   hypothetical protein
replicative DNA helicase
replicative DNA helicase, phage origin
conserved hypothetical protein 
157  inverse 2.00 1426902,1427440
1532253,1532791
538 NG1461 , NG1462 , IGR1193, IGR1194, NG1556 , NG1557 , IGR1269.1, IGR1270  hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein 
158  inverse 2.00 155216,155732
1419199,1419715
516 NG0146.2 , IGR0120.1, IGR1186.1  transposase 
159  inverse 2.00 468742,469250
1065635,1066143
508 NG0487 , IGR0404, NG1108 , IGR0897  hypothetical protein
hypothetical protein 
160  inverse 2.00 1103493,1103997
1659051,1659555
504 NG1164 , IGR0940.2, NG1702 , NG1703   pilin gene inverting protein
conserved hypothetical protein
pilin gene inverting protein homolog PivNG 
161  inverse 2.00 768375,768853
1102886,1103364
478 NG0773 , IGR0645, NG1163.1 , IGR0940  pilin gene inverting protein homolog PivNG
pilin gene inverting protein 
162  inverse 2.00 1148787,1149265
1541129,1541607
478 NG1202 , IGR0970.1, NG1568.1 , IGR1282  transposase
transposase 
163  inverse 2.00 465055,465525
1069426,1069896
470 NG0480 , NG0481 , NG0482 , IGR0399, IGR0400, NG1113 , NG1114 , IGR0901, IGR0902  hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein 
164  inverse 2.00 468288,468741
1066144,1066597
453 NG0485 , NG0486 , NG0487 , IGR0402, IGR0403, NG1108 , NG1109 , NG1110 , IGR0898, IGR0899  replicative DNA helicase
hypothetical protein
hypothetical protein
hypothetical protein
hypothetical protein
replicative DNA helicase, phage origin 
165  inverse 2.00 78184,78636
187633,188085
452 NG0072.1 , IGR0058.1, NG0186.1 , IGR0151  possible transposase
transposase fragment of IS1016 
166  inverse 2.00 1102914,1103364
1659683,1660133
450 NG1163.1 , IGR0940, NG1703 , IGR1389  pilin gene inverting protein
pilin gene inverting protein homolog PivNG 
167  inverse 2.00 578174,578610
1148604,1149040
436 NG0591 , IGR0494.1, NG1201 , NG1202 , IGR0970  IS1016 Transposase
Neisseria-specific protein, uncharacterized
transposase 
168  inverse 2.00 1481099,1481524
2037121,2037546
425 NG1513 , NG1512.1 , IGR1237.1, IGR1702  outer membrane opacity protein
pilin protein 
169  inverse 2.00 864896,865313
1419199,1419616
417 NG0883 , NG0884 , IGR0734, IGR1186.1  hypothetical protein
probable transposase fragment - Neisseria specific 
170  inverse 2.00 768438,768853
1599248,1599663
415 NG0773 , IGR0645, NG1641 , IGR1337  pilin gene inverting protein homolog PivNG
pilin gene inverting protein homolog PivNG 
171  inverse 2.00 467062,467475
1067410,1067823
413 NG0485 , NG1110   replicative DNA helicase
replicative DNA helicase, phage origin 
172  inverse 2.00 1541163,1541564
1871542,1871943
401 NG1568.1 , IGR1282, NG1901.1 , IGR1560.1  transposase
transposase related 
173  inverse 2.00 1065787,1066183
1597321,1597717
396 NG1108 , IGR0898, NG1638 , IGR1334  hypothetical protein
hypothetical protein 
174  inverse 2.00 1599276,1599663
1659746,1660133
387 NG1641 , IGR1337, NG1703 , IGR1389  pilin gene inverting protein homolog PivNG
pilin gene inverting protein homolog PivNG 
175  inverse 2.00 1080493,1080867
1599664,1600038
374 NG1137 , NG1641   pilin gene inverting protein homolog PivNG
pilin gene inverting protein homolog PivNG 
176  inverse 2.00 1065419,1065786
1597718,1598085
367 NG1107 , NG1108 , IGR0897, NG1638 , NG1639 , IGR1335  hypothetical protein
hypothetical protein
hypothetical protein
conserved hypothetical protein 
177  inverse 2.00 1025795,1026155
1715163,1715523
360 NG1066 , IGR0868, IGR0868.1, NG1754 , IGR1429  transposase
IS1016 fragment (C-terminus of IS1016 transposases); MfaI plasmid maintenance protein? 
178  inverse 2.00 1600011,1600363
1659046,1659398
352 NG1641 , IGR1338, NG1702 , NG1703   pilin gene inverting protein homolog PivNG
conserved hypothetical protein
pilin gene inverting protein homolog PivNG 
179  inverse 2.00 204815,205166
1376134,1376485
351 NG0201 , IGR0164, NG1412 , IGR1151  IS1016 transposase
IS1016 transposase 
180  inverse 3.00 74807,75142
1481925,1482260
2036419,2036744
335 NG0070 , NG1513 , IGR1702  outer membrane opacity protein B (opaB)
outer membrane opacity protein 
181  inverse 2.00 1097788,1098119
1376507,1376838
331 NG1157 , IGR0934, NG1412 , IGR1152  IS1016 transposase
IS1016 transposase 
182  inverse 2.00 187829,188154
1148625,1148950
325 NG0186.1 , IGR0151.1, NG1201 , NG1202 , IGR0970  transposase fragment of IS1016
Neisseria-specific protein, uncharacterized
transposase 
183  inverse 2.00 1216628,1216947
1659051,1659370
319 NG1262 , IGR1028, NG1702 , NG1703   pilin gene inverting protein homolog PivNG
conserved hypothetical protein
pilin gene inverting protein homolog PivNG 
184  inverse 4.00 38563,38879
155416,155732
864997,865313
976483,976799
316 IGR0033, NG0146.2 , IGR0120.1, NG0883 , NG0884 , IGR0734, NG1006 , IGR0830  transposase
hypothetical protein
probable transposase fragment - Neisseria specific
Neisseria-specific protein, possible transposase 



Copy #is the number of repeat units
Location is given in genome coordinates
Length is the size of the consensus repeat unit in nucleotides
Gene & Intergenic Id(s) are the ids of the gene and intergenic space records in which the repeat is located
Definitions-Comments are the definition lines from the genes and the comments from the intergenic space records in the previous columns


LOS ALAMOS NATIONAL LABORATORY
Operated by the University of California for the National Nuclear Security Administration,
of the US Department of Energy.     Copyright © 2002 UC | Disclaimer/Privacy