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Repeat Table for Mycoplasma genitalium

Repeat Name Copy # Location Length Gene & Intergenic Id(s) Definitions-Comments
21  2.00 230454,230641
350277,350464
188 IGR139, IGR213  tRNA-Trp-2 overlaps with MG287 (possible acyl carrier protein). The length of the overlap is 7 nucleotides and the region of overlap is on the C-terminus of MG287 and on the 5' end on tRNA-Trp-2. This indicates the possibility of a promoter located within MG287 or that one transcript encodes both. 
22  2.00 167754,167878
214097,214221
125 IGR98, IGR134   
23  2.00 226957,227087
351279,351409
131 MG192 , IGR213  Mycoplasma-specific conserved hypothetical protein (114 kDa protein, MgPa operon)
tRNA-Trp-2 overlaps with MG287 (possible acyl carrier protein). The length of the overlap is 7 nucleotides and the region of overlap is on the C-terminus of MG287 and on the 5' end on tRNA-Trp-2. This indicates the possibility of a promoter located within MG287 or that one transcript encodes both. 
24  2.00 258166,258266
258286,258386
101 MG217 , MG217   Mycoplasma-specific conserved hypothetical protein (possible proline-rich P65 protein)
Mycoplasma-specific conserved hypothetical protein (possible proline-rich P65 protein) 
25  2.00 226780,226893
428958,429071
114 MG192 , IGR253  Mycoplasma-specific conserved hypothetical protein (114 kDa protein, MgPa operon) 
26  3.00 167684,167811
223941,224068
273409,273536
128 IGR98, MG191 , IGR166  Mycoplasma-specific attachment protein, MgPa operon, adhesin P1 
27  2.00 389256,389488
390168,390400
233 MG312 , MG312   cytadherence high molecular weight protein (cytadherence-accessory protein)
cytadherence high molecular weight protein (cytadherence-accessory protein) 
28  2.00 485509,485614
485968,486073
106 MG386 , MG386   protein P200, cytadherence accessory protein
protein P200, cytadherence accessory protein 
29  2.00 168519,168667
350490,350638
149 IGR98, IGR213  tRNA-Trp-2 overlaps with MG287 (possible acyl carrier protein). The length of the overlap is 7 nucleotides and the region of overlap is on the C-terminus of MG287 and on the 5' end on tRNA-Trp-2. This indicates the possibility of a promoter located within MG287 or that one transcript encodes both. 
30  2.00 86926,87035
350490,350599
110 IGR49, IGR213  tRNA-Trp-2 overlaps with MG287 (possible acyl carrier protein). The length of the overlap is 7 nucleotides and the region of overlap is on the C-terminus of MG287 and on the 5' end on tRNA-Trp-2. This indicates the possibility of a promoter located within MG287 or that one transcript encodes both. 
31  2.00 214802,214920
226111,226229
119 IGR134, MG192   Mycoplasma-specific conserved hypothetical protein (114 kDa protein, MgPa operon) 
32  2.00 86677,86783
168261,168367
107 IGR49, IGR98   
33  2.00 215261,215362
350895,350996
102 IGR134, IGR213  tRNA-Trp-2 overlaps with MG287 (possible acyl carrier protein). The length of the overlap is 7 nucleotides and the region of overlap is on the C-terminus of MG287 and on the 5' end on tRNA-Trp-2. This indicates the possibility of a promoter located within MG287 or that one transcript encodes both. 
34  2.00 229813,229928
349623,349738
116 IGR139, IGR213  tRNA-Trp-2 overlaps with MG287 (possible acyl carrier protein). The length of the overlap is 7 nucleotides and the region of overlap is on the C-terminus of MG287 and on the 5' end on tRNA-Trp-2. This indicates the possibility of a promoter located within MG287 or that one transcript encodes both. 
35  2.00 226975,227158
429153,429336
184 MG192 , IGR253  Mycoplasma-specific conserved hypothetical protein (114 kDa protein, MgPa operon) 
36  2.00 351297,351409
429153,429265
113 IGR213, IGR253  tRNA-Trp-2 overlaps with MG287 (possible acyl carrier protein). The length of the overlap is 7 nucleotides and the region of overlap is on the C-terminus of MG287 and on the 5' end on tRNA-Trp-2. This indicates the possibility of a promoter located within MG287 or that one transcript encodes both. 
37  2.00 224061,224176
430173,430288
116 MG191 , IGR253  Mycoplasma-specific attachment protein, MgPa operon, adhesin P1 
38  2.00 227226,227331
351545,351650
106 MG192 , IGR213  Mycoplasma-specific conserved hypothetical protein (114 kDa protein, MgPa operon)
tRNA-Trp-2 overlaps with MG287 (possible acyl carrier protein). The length of the overlap is 7 nucleotides and the region of overlap is on the C-terminus of MG287 and on the 5' end on tRNA-Trp-2. This indicates the possibility of a promoter located within MG287 or that one transcript encodes both. 
39  2.00 168773,168889
226425,226541
117 IGR98, MG192   Mycoplasma-specific conserved hypothetical protein (114 kDa protein, MgPa operon) 
40  2.00 169593,169726
429405,429538
134 IGR98, IGR253   
41  2.00 169490,169609
227130,227249
120 IGR98, MG192   Mycoplasma-specific conserved hypothetical protein (114 kDa protein, MgPa operon) 
42  2.00 223902,224075
273370,273543
174 MG191 , IGR166  Mycoplasma-specific attachment protein, MgPa operon, adhesin P1 
43  2.00 169394,169509
227049,227164
116 IGR98, MG192   Mycoplasma-specific conserved hypothetical protein (114 kDa protein, MgPa operon) 
44  2.00 169394,169503
429227,429336
110 IGR98, IGR253   
45  2.00 389734,389845
390646,390757
112 MG312 , MG312   cytadherence high molecular weight protein (cytadherence-accessory protein)
cytadherence high molecular weight protein (cytadherence-accessory protein) 
46  2.00 86885,87035
168478,168628
151 IGR49, IGR98   
47  2.00 168196,168302
214568,214674
107 IGR98, IGR134   
48  2.00 389490,389732
390402,390644
243 MG312 , MG312   cytadherence high molecular weight protein (cytadherence-accessory protein)
cytadherence high molecular weight protein (cytadherence-accessory protein) 



Copy #is the number of repeat units
Location is given in genome coordinates
Length is the size of the consensus repeat unit in nucleotides
Gene & Intergenic Id(s) are the ids of the gene and intergenic space records in which the repeat is located
Definitions-Comments are the definition lines from the genes and the comments from the intergenic space records in the previous columns


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