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Biochemical pathways for Haemophilus ducreyi



Carbohydrate Metabolism
    Glycolysis / Gluconeogenesis
    Citrate cycle (TCA cycle)
    Pentose phosphate cycle
    Pentose and glucuronate interconversions
    Fructose and mannose metabolism
    Galactose metabolism
    Ascorbate and aldarate metabolism
    Pyruvate metabolism
    Glyoxylate and dicarboxylate metabolism
    Propanoate metabolism
    Butanoate metabolism
    Butanoate metabolism

Energy Metabolism
    Oxidative phosphorylation
    ATP synthase
    Methane metabolism
    Carbon fixation
    Reductive carboxylate cycle (CO2 fixation)
    Nitrogen metabolism
    Sulfur metabolism

Lipid Metabolism
    Fatty acid biosynthesis (path 1)
    Fatty acid biosynthesis (path 1)
    Fatty acid metabolism
    Fatty acid metabolism
    Sterol biosynthesis
    Bile acid biosynthesis
    Bile acid biosynthesis
    Androgen and estrogen metabolism

Nucleotide Metabolism
    Purine metabolism
    Pyrimidine metabolism
    Nucleotide sugars metabolism

Amino Acid Metabolism
    Glutamate metabolism
    Alanine and aspartate metabolism
    Glycine, serine and threonine metabolism
    Methionine metabolism
    Cysteine metabolism
    Valine, leucine and isoleucine degradation
    Valine, leucine and isoleucine biosynthesis
    Lysine biosynthesis
    Lysine degradation
    Arginine and proline metabolism
    Histidine metabolism
    Tyrosine metabolism
    Phenylalanine metabolism
    Tryptophan metabolism
    Phenylalanine, tyrosine and tryptophan biosynthesis
    Urea cycle and metabolism of amino groups

Metabolism of Other Amino Acids
    beta-Alanine metabolism
    beta-Alanine metabolism
    Aminophosphonate metabolism
    Selenoamino acid metabolism
    Cyanoamino acid metabolism
    D-Glutamine and D-glutamate metabolism
    D-Arginine and D-ornithine metabolism
    D-Alanine metabolism
    Glutathione metabolism

Metabolism of Complex Carbohydrates
    Starch and sucrose metabolism
    Biosynthesis and degradation of glycoprotein
    Aminosugars metabolism
    Lipopolysaccharide biosynthesis
    Peptideglycan biosynthesis
    Glycosaminoglycan degradation

Metabolism of Complex Lipids
    Glycerolipid metabolism
    Inositol phosphate metabolism
    Inositol phosphate metabolism
    Phospholipid degradation
    Sphingoglycolipid metabolism
    Sphingoglycolipid metabolism

Metabolism of Cofactors and Vitamins
    Thiamine metabolism
    Riboflavin metabolism
    Vitamin B6 metabolism
    Nicotinate and nicotinamide metabolism
    Pantothenate and CoA biosynthesis
    Biotin metabolism
    Folate biosynthesis
    One carbon pool by folate
    One carbon pool by folate
    Porphyrin and chlorophyll metabolism
    Ubiquinone biosynthesis

Pathway images were obtained from KEGG database Release 7.1 by searching the KEGG database with E.C. numbers. Those pathways in KEGG that involve nonenzymatic proteins were searched manually. Pathway figures are being modified as time permits to add relevant information and to remove irrelevant information.

Reference: KEGG: Kyoto Encyclopedia of Genes and Genomes Institute for Chemical Research, Kyoto University, Japan http://www.genome.ad.jp/kegg/
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