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Haemophilus ducreyi Search Results

Record: 1 of 1  
MiniMap IGR1139 IGR1138 IGR1140 IGR1141 IGR1136 IGR1142 IGR1137 HD1568 HD1563 HD1567 HD1558 HD1562 HD1565 HD1561 HD1559 HD1556 HD1569 HD1568 HD1563 HD1567 HD1558 HD1562 HD1565 HD1561 HD1559 HD1556 HD1569 HD1568 HD1567 HD1558 HD1562 HD1565 HD1561 HD1559 HD1556 HD1569 HD1564 HD1560 HD1557 HD1560 HD1557 HD1563 HD1564
* Calculated from Protein Sequence

Gene ID: HD1561

DNA Molecule Name:
1  

Genbank ID:
0

Gene Name:


Definition:
conserved hypothetical protein

Gene Start:
1283088

Gene Stop:
1284014

Gene Length:
927

Molecular Weight*:
33873

pI*:
6.80

Net Charge*:
-0.31

EC:
 

Functional Class:
Unknown  

Pathway: pathway table

Comment:


Blast Summary:  PSI-Blast Search
Residues 9-306 are 24% similar to >16760414 hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]

No similarity with C. trachomatis, C. pneumoniae, M. genitalium, M. pneumoniae, U. urealyticum, or T. pallidum.


COGS Summary:  COGS Search
No hits to the COGs database.

Blocks Summary:  Blocks Search
No significant hits to the Blocks database.

ProDom Summary:  Protein Domain Search
No significant hits to the ProDom database.

Paralogs:  Local Blast Search
HD1561 has no significant similarity (blastp p-value < 1e-3) to any other gene in this genome.


Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

PDB Hit:
No significant hits to the NCBI PDB database.

Gene Protein Sequence:
MSKANFPTDPALTAIAIAYRNRRMIADEVLPRTPVAKQEFTYLHYNLGEG
FTVPNARVGRTSRPNQVEFGATQLTSSTEDFALDAPVPLVDIANKPTNYN
PKGRATEQTTNLIELGREVRTANLVFNKKSYANGLTKTLSGNNQWSHDDS
KPIADLLSALDTPVMRPNIMVLGQKAATALRTNKSIIKAYNGSLGDEGLV
PLEYLKELFELEDIYVGQALINTVNQAKKAVLQQAWGNHCALIYRDRLAD
TNGGTTFGLTAQFGSREVRDIFDENMGMRGGYNVRVGESVKELITAPDLG
FFLENVIA$

Gene Nucleotide Sequence:  Sequence Viewer
ATGAGTAAAGCTAATTTCCCTACTGATCCCGCACTCACTGCAATCGCTAT
TGCTTATCGAAATCGCCGTATGATTGCAGATGAAGTGTTACCTCGTACTC
CAGTTGCCAAACAAGAATTTACGTATCTTCACTATAACCTCGGTGAAGGT
TTTACTGTACCGAATGCCCGTGTTGGTCGTACGTCACGTCCGAATCAAGT
GGAGTTTGGTGCAACACAACTAACGTCATCCACTGAAGATTTTGCACTCG
ATGCCCCAGTACCATTAGTAGATATTGCTAATAAGCCGACAAACTATAAC
CCGAAAGGACGCGCTACAGAACAAACGACAAATTTAATTGAATTAGGTCG
AGAAGTACGTACAGCAAACCTAGTTTTTAACAAAAAATCCTATGCCAATG
GATTAACAAAAACGTTATCTGGCAATAACCAATGGTCACATGATGACAGT
AAACCGATCGCAGATCTATTAAGTGCATTAGATACCCCGGTTATGCGACC
GAATATTATGGTGTTAGGTCAAAAAGCGGCAACAGCATTACGTACCAATA
AATCTATTATTAAAGCGTATAACGGCTCTTTAGGTGATGAAGGACTTGTT
CCGCTTGAATATCTCAAAGAATTATTTGAACTGGAAGATATCTATGTCGG
TCAGGCGTTAATCAATACTGTTAATCAAGCCAAAAAAGCAGTCCTTCAGC
AGGCTTGGGGAAATCATTGTGCCTTGATTTACCGTGATCGTTTAGCGGAT
ACCAATGGTGGAACAACCTTTGGGCTGACAGCACAATTTGGCTCTCGTGA
AGTACGTGATATTTTCGATGAAAATATGGGAATGCGTGGTGGCTATAACG
TCCGTGTTGGTGAATCTGTGAAAGAGCTAATCACGGCTCCTGATCTTGGT
TTCTTCCTTGAGAATGTTATTGCTTAG


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