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Haemophilus ducreyi Search Results

Record: 1 of 1  
MiniMap IGR1133 IGR1135 IGR1131 IGR1134 IGR1127 IGR1128 IGR1132 IGR1129 IGR1130 HD1547 HD1553 HD1552 HD1548 HD1541 HD1546 HD1542 HD1554 HD1549 HD1543 HD1556 HD1555 HD1547 HD1553 HD1552 HD1548 HD1541 HD1546 HD1542 HD1554 HD1549 HD1543 HD1556 HD1555 HD1547 HD1542 HD1554 HD1543 HD1556 HD1555 HD1545 HD1550 HD1557 HD1557 HD1552 HD1546 HD1549 HD1541 HD1545 HD1550 HD1553 HD1548
* Calculated from Protein Sequence

Gene ID: HD1553

DNA Molecule Name:
1  

Genbank ID:
0

Gene Name:


Definition:
conserved hypothetical protein

Gene Start:
1275605

Gene Stop:
1275910

Gene Length:
306

Molecular Weight*:
11507

pI*:
8.40

Net Charge*:
1.66

EC:
 

Functional Class:
Unknown  

Pathway: pathway table

Comment:


Blast Summary:  PSI-Blast Search
Residues 1-101 are 45% similar to >16760407 hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]. No other hits in gaspped BLAST.

COGS Summary:  COGS Search
No hits to the COGs database.

Blocks Summary:  Blocks Search
No significant hits to the Blocks database.

ProDom Summary:  Protein Domain Search
No significant hits to the ProDom database.

Paralogs:  Local Blast Search
HD1553 has no significant similarity (blastp p-value < 1e-3) to any other gene in this genome.


Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

PDB Hit:
No significant hits to the NCBI PDB database.

Gene Protein Sequence:
MIEFDKNKREHVRWLILLTLDHARPIGAAESLILSTIQCVPMQLTALELR
RELDYLAGKALIEIKGRDTARWHAKLTSNGVDVVEYTSPANPGIARPEKY
W$

Gene Nucleotide Sequence:  Sequence Viewer
ATGATTGAATTTGATAAAAATAAACGTGAACACGTACGCTGGTTAATTTT
GCTTACTCTCGACCATGCTCGTCCAATTGGTGCAGCGGAAAGTCTGATTT
TAAGCACGATTCAATGTGTACCAATGCAGCTAACTGCATTAGAACTTCGC
CGTGAATTAGATTATCTAGCAGGTAAAGCATTAATCGAAATTAAGGGACG
AGATACGGCTCGCTGGCACGCTAAGCTAACAAGTAATGGCGTAGATGTTG
TGGAATATACGTCACCAGCAAACCCAGGAATCGCACGTCCTGAAAAATAT
TGGTAA


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