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Haemophilus ducreyi Search Results

Record: 1 of 1  
MiniMap IGR1059 IGR1056 IGR1058 IGR1061 IGR1062 IGR1060 IGR1064 IGR1065 IGR1055 IGR1057 IGR1063 HD1441 HD1446 HD1437 HD1443 HD1439 gspD, - HD1436 HD1444 HD1434 nadV, - HD1445 ompP2,ompH, - HD1435 ompP2,ompH, - HD1433 nadV, - HD1447 HD1441 HD1446 HD1437 HD1443 HD1439 gspD, - HD1436 HD1444 HD1434 nadV, - HD1445 ompP2,ompH, - HD1435 ompP2,ompH, - HD1433 nadV, - HD1447 HD1446 HD1437 HD1439 gspD, - HD1436 HD1444 HD1440 HD1442 HD1443 HD1441 HD1442 HD1440 HD1434 nadV, - HD1445 ompP2,ompH, - HD1435 ompP2,ompH, - HD1433 nadV, - HD1447
* Calculated from Protein Sequence

Gene ID: HD1439

DNA Molecule Name:
1  

Genbank ID:
0

Gene Name:


Definition:
conserved hypothetical protein

Gene Start:
1180114

Gene Stop:
1179125

Gene Length:
990

Molecular Weight*:
34657

pI*:
5.70

Net Charge*:
-6.39

EC:
 

Functional Class:
Unknown  

Pathway: pathway table

Comment:


Blast Summary:  PSI-Blast Search
Residues 219-329 are 33% similar to residues 466-570 of 16122501 phage hypothetical protein [Yersinia pestis].

No similarities to C. trachomatis, C. pneumoniae, U. urealyticum, T. pallidum, M. genitalium, or M. pneumoniae.

COGS Summary:  COGS Search
No hits to the COGs database.

Blocks Summary:  Blocks Search
No significant hits to the Blocks database.

ProDom Summary:  Protein Domain Search
No significant hits to the ProDom database.

Paralogs:  Local Blast Search
HD1439 is paralogously related to HD1448 (2e-09).


Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

PDB Hit:
No significant hits to the NCBI PDB database.

Gene Protein Sequence:
MASVKKLTDGDPSAPRVDVKTIIDDSSLVINYGDGERNSIWGDGFFKYAE
KFEFSSNLSSSQSATANAALKTALMQGRCDIAESLLSAMVQGDIHATDEG
DKYIGFSNGEDKCIIRDNGDSLCRVKGPALECNAAGQDCQIAIGNDKELN
LQQYANSEQKEKEILSSPDSGQGSPSITSYNGSSSTGTASSNSGSQAGAI
GSSHAGKGAVSTNSLGKENQSGHHGSKGGHADGKGKGDEEGLANMQVEHP
NLKEFNIKSALFGLKSKLKQFTPELSMPGGQCPTLAVPIFNTTKDINVHC
QVFEQHGSKLSAIFLLIWGFLAIRILLSA$

Gene Nucleotide Sequence:  Sequence Viewer
ATGGCATCCGTGAAGAAACTAACCGATGGAGACCCTTCTGCGCCGCGTGT
TGATGTTAAAACGATCATTGATGATTCAAGCTTAGTGATTAACTACGGTG
ATGGAGAGAGGAACTCTATTTGGGGAGATGGCTTTTTTAAATATGCCGAA
AAATTTGAGTTCAGTTCAAATTTATCTTCAAGTCAATCAGCCACGGCTAA
TGCCGCACTTAAAACGGCCTTAATGCAGGGCAGATGTGACATTGCTGAAT
CATTGCTTTCAGCAATGGTACAAGGGGATATTCATGCCACCGATGAGGGG
GATAAATATATTGGGTTTAGCAATGGGGAGGATAAATGTATTATCCGTGA
TAATGGAGATTCTTTATGTAGGGTAAAAGGGCCTGCTTTAGAATGTAATG
CCGCGGGACAAGACTGCCAAATTGCCATAGGTAACGACAAGGAACTTAAC
CTACAACAATATGCAAATTCAGAACAAAAAGAAAAAGAAATTTTATCTTC
ACCCGACTCGGGGCAGGGCTCGCCAAGCATAACTTCTTACAATGGTAGCT
CTTCTACTGGCACTGCTTCTAGTAATAGCGGTTCACAGGCTGGCGCTATC
GGCTCTTCTCATGCAGGTAAAGGCGCTGTTTCAACGAACTCATTAGGTAA
AGAAAACCAAAGTGGCCATCATGGTTCGAAAGGTGGGCATGCAGATGGAA
AAGGTAAAGGTGATGAAGAAGGCTTGGCAAATATGCAAGTTGAACATCCA
AATTTAAAAGAATTTAACATTAAATCTGCTTTGTTTGGTTTGAAATCCAA
GCTTAAACAATTTACACCCGAACTATCTATGCCTGGAGGGCAGTGTCCTA
CACTTGCTGTTCCTATTTTTAATACCACTAAAGATATTAATGTGCACTGC
CAAGTTTTTGAACAGCATGGTAGTAAGTTGTCGGCAATATTTTTATTGAT
TTGGGGCTTTCTTGCCATCCGAATTCTACTGTCTGCTTAG


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