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Haemophilus ducreyi Search Results

Record: 1 of 1  
MiniMap IGR357 IGR359 IGR360 IGR354 IGR361 IGR362 IGR358 IGR355 IGR363 HD0516 HD0510 HD0499 HD0506 HD0517 HD0502 HD0504 HD0500 HD0509 HD0498 HD0501 HD0512 HD0518 HD0514 HD0516 HD0510 HD0499 HD0506 HD0517 HD0502 HD0504 HD0500 HD0509 HD0498 HD0501 HD0512 HD0518 HD0514 HD0516 HD0517 HD0498 HD0501 HD0512 HD0518 HD0514 HD0503 HD0507 HD0511 HD0515 HD0511 HD0515 HD0504 HD0509 HD0502 HD0500 HD0510 HD0506 HD0503 HD0499 HD0507
* Calculated from Protein Sequence

Gene ID: HD0512

DNA Molecule Name:
1  

Genbank ID:
0

Gene Name:


Definition:
conserved hypothetical protein

Gene Start:
390704

Gene Stop:
391615

Gene Length:
912

Molecular Weight*:
34919

pI*:
6.00

Net Charge*:
-6.38

EC:
 

Functional Class:
Unknown  

Pathway: pathway table

Comment:


Blast Summary:  PSI-Blast Search
Three significant hits in gapped BLAST to conserved hypothetical protein sequences found in Neisseria meningitidis, e.g. residues 3-301 are 68% similar to hypothetical protein of Neisseria meningitidis MC58 (7226332|).

COGS Summary:  COGS Search
No hits to the COGs database.

Blocks Summary:  Blocks Search
No significant hits to the Blocks database.

ProDom Summary:  Protein Domain Search
Residues 3-301 are 68% similar to a (PROTEOME COMPLETE NMA1313 NMA1852) protein domain (PD340505) which is seen in Q9JZE3_NEIMB.



Paralogs:  Local Blast Search
HD0512 has no significant similarity (blastp p-value < 1e-3) to any other gene in this genome.


Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

PDB Hit:
No significant hits to the NCBI PDB database.

Gene Protein Sequence:
MWGTILHYDSVLNRILNTKGWKRVRFKAILRMPDNMVLWDEWENIYLSED
GDDDTLSDAFYKQHKVEMDKGAIVSWLARPILYLMKIRASDGHAAFDSEY
QNDPISGDGAMFANSLQYWTELPENLVYFGALDPSLGKAGASRDPSAILV
GGYHRETGKLYVVEAQIKKRLPDLIIEDVIRLHTQYKCHRWFVETVQFQE
FLKTELVKRSAQRGNPVPATATKPNSDKMLRIESLQPHIANGLILLHRSQ
STLESQLRHFPKADHDDGPDALEMLWRNAVSSSAPIEWEAIDDDDYEYSK
WRH$

Gene Nucleotide Sequence:  Sequence Viewer
ATGTGGGGGACAATTCTACATTATGACAGCGTACTTAACCGTATTTTAAA
TACAAAAGGCTGGAAACGTGTCCGCTTTAAAGCCATTTTGCGAATGCCAG
ACAATATGGTGTTATGGGACGAGTGGGAAAATATTTATCTATCTGAAGAT
GGCGATGATGACACGCTATCAGATGCGTTTTATAAACAACATAAAGTCGA
AATGGATAAGGGTGCAATTGTATCGTGGCTTGCTCGTCCGATTTTGTACT
TAATGAAGATTAGAGCTTCTGACGGTCACGCTGCGTTTGATTCTGAGTAT
CAAAACGACCCAATTTCGGGTGATGGCGCAATGTTTGCGAATAGTTTGCA
GTATTGGACGGAGCTCCCCGAAAATTTAGTTTACTTTGGCGCACTTGACC
CTTCTTTGGGTAAAGCAGGAGCAAGCCGTGACCCTTCGGCAATTTTGGTC
GGCGGCTACCATCGCGAAACAGGTAAGCTGTATGTTGTTGAGGCGCAAAT
TAAAAAACGACTACCTGATTTGATTATTGAGGATGTTATCCGCTTGCACA
CGCAATACAAATGTCATCGTTGGTTCGTGGAAACAGTGCAATTCCAAGAA
TTTTTAAAAACGGAATTAGTAAAACGTTCAGCGCAACGTGGTAACCCCGT
TCCTGCCACCGCTACAAAACCGAATAGCGATAAGATGTTACGTATCGAAA
GCCTACAACCACATATTGCCAACGGCTTGATTTTACTACACCGCTCACAA
AGCACGCTTGAAAGTCAGCTACGGCATTTTCCAAAAGCGGATCACGATGA
TGGTCCAGATGCGTTGGAGATGTTATGGCGCAATGCGGTGAGCAGTTCAG
CACCGATTGAGTGGGAGGCTATCGATGATGACGATTATGAGTACAGTAAG
TGGCGTCACTAA


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