Basic Search | Intermediate Search | Advanced SQL Search | Gene Image Map |  Home

Chlamydia pneumoniae Search Results

Record: 1 of 1  
MiniMap IGR698 IGR697 IGR693 IGR691 IGR690 IGR694 IGR692 IGR696 IGR695 CPn0879 serS, - CPn0870 CPn0874 ybcL, - CPn0877 CPn0873 CPn0875 ribD, - CPn0871 ribA, - CPn0872 dagA_2, - CPn0876 CPn0879 serS, - CPn0870 CPn0874 ybcL, - CPn0877 CPn0873 CPn0875 ribD, - CPn0871 ribA, - CPn0872 dagA_2, - CPn0876 CPn0879 serS, - CPn0870 CPn0874 CPn0878 CPn0878 ybcL, - CPn0877 CPn0873 CPn0875 ribD, - CPn0871 ribA, - CPn0872 dagA_2, - CPn0876
* Calculated from Protein Sequence

Gene ID: CPn0874

DNA Molecule Name:
1  

Genbank ID:


Gene Name:


Definition:
Chlamydia-specific hypothetical protein

Gene Start:
993107

Gene Stop:
991746

Gene Length:
1362

Molecular Weight*:
50680

pI*:
8.80

Net Charge*:
8.09

EC:
 

Functional Class:
unknown; Chlamydia-specific proteins  

Pathway: pathway table

Comment:


Blast Summary:  PSI-Blast Search
Single significant hit in gapped BLAST to CT733, a hypothetical protein sequence. Residues 28-453 are 61% similar to CT733.
No significant similarity to T.pallidum, M.genitalium, or U.urealyticum.

COGS Summary:  COGS Search
No hit to the COGs database.

Blocks Summary:  Blocks Search
None.

ProDom Summary:  Protein Domain Search
None.

Paralogs:  Local Blast Search
No paralogs found in C.pneumoniae.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

Structural Feature(s):
Feature Type  Start  Stop
gram negative signal  
1  
26
non-globular  
191  
268

PDB Hit:


Gene Protein Sequence:
MLKILKIKVLVFPLALLMGCNSIGYAGPQGSLQTNSQTKVKIGSEVWIEQ
KLRQYPELLWLTESGGAPLLTSTPIDMAYSEKLFNKKVPALDIAIRSMIH
LHLLIQGSRQSYMQLSQILPSEEGGMTFKQFQTAHKQLLFFLNSPKSFDN
TLRILETAIVLRHVGCSAKAVTTFKPYFTDSCPQSFYAKALHVLRTFPEL
CPSYARLSPEQQEVLLSLRRLGNYDSLLNLTEVPSAQLLSAWRTRRSLAI
LDLYLYCLDTCGDKNCSQEFYINFAPLLSMLQQHATIEEAFSRYFTYRAN
RLGFEGTSRTDMTLVRLATLMNLSPSEASTLAWSFKNLPSDEAENLVNSF
YTVQGEHIPLTFRGLPSLVAGLSVATHGSTVSPENRLRQLYSTMLSLLVK
SLRSHREMLNKQLLPQGTVLDFSETTLSSGGLDVFAESIAVRIHLNGAVS
INL$

Gene Nucleotide Sequence:  Sequence Viewer
ATGTTAAAAATTCTTAAAATCAAAGTCTTGGTTTTCCCATTAGCTTTACT
TATGGGATGCAATTCTATCGGCTATGCTGGCCCCCAAGGATCTCTACAGA
CGAACTCGCAGACAAAGGTTAAAATTGGTTCTGAGGTTTGGATAGAACAA
AAACTACGTCAGTATCCTGAGCTTCTTTGGCTTACGGAATCTGGAGGGGC
TCCTCTTCTCACATCGACTCCTATCGATATGGCCTATTCTGAAAAGCTCT
TTAATAAAAAAGTCCCCGCTTTAGACATTGCGATTCGCAGTATGATTCAC
CTACATCTTTTGATACAGGGGTCTCGTCAATCTTACATGCAGCTCTCTCA
GATCCTCCCTTCTGAAGAAGGAGGTATGACATTTAAGCAATTCCAGACGG
CGCACAAACAATTATTGTTCTTTTTAAATTCTCCTAAGAGTTTCGATAAT
ACCTTGAGAATTTTAGAAACAGCGATCGTGCTCAGACATGTAGGCTGCTC
TGCAAAAGCTGTCACCACGTTTAAGCCTTATTTCACAGACTCGTGCCCAC
AGAGCTTTTACGCAAAGGCGTTACATGTGTTGCGTACTTTCCCTGAACTT
TGTCCTTCTTATGCGAGGCTTTCTCCAGAACAGCAAGAAGTCTTGTTATC
TCTAAGACGTTTGGGCAACTACGATTCTCTACTGAACTTAACAGAGGTTC
CTAGTGCGCAGCTGCTTTCTGCTTGGAGAACACGTCGGTCTCTTGCGATC
TTAGATTTGTACCTGTATTGCTTAGATACCTGTGGAGACAAGAACTGTTC
TCAAGAGTTCTATATAAACTTTGCTCCTCTACTTTCCATGTTACAGCAGC
ATGCGACTATAGAAGAGGCATTCTCTCGTTATTTTACTTATCGAGCGAAT
CGTTTAGGTTTTGAGGGAACCTCTCGAACGGACATGACTTTGGTTCGCTT
AGCAACATTAATGAATCTCTCTCCGTCGGAAGCGAGTACTTTGGCGTGGA
GTTTTAAAAATTTACCTTCTGATGAAGCTGAGAATCTTGTTAACAGTTTC
TATACAGTACAAGGAGAGCATATTCCTTTAACATTTCGTGGTCTTCCCAG
TTTAGTTGCGGGACTTTCGGTCGCGACTCATGGATCTACGGTAAGTCCAG
AAAATCGTCTACGTCAATTATACTCGACAATGCTATCCTTATTGGTAAAA
AGCTTACGTTCTCATAGAGAAATGCTAAATAAACAACTTCTCCCGCAAGG
GACTGTGTTAGATTTTTCTGAGACGACATTGTCTTCGGGAGGCTTGGATG
TCTTTGCTGAGAGTATCGCAGTTCGCATCCATTTAAATGGAGCTGTCAGC
ATCAATCTGTAG


Los Alamos National Laboratory     
Operated by the University of California for the National Nuclear Security Administration,
of the US Department of Energy.     Copyright © 2001 UC | Disclaimer/Privacy