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Chlamydia pneumoniae Search Results

Record: 1 of 1  
MiniMap IGR655 IGR656 IGR657 IGR664 IGR658 IGR660 IGR661 IGR662 IGR663 IGR659 sctS,yscS,fliQ, - CPn0824 yscL,sctL, - CPn0826 CPn0827 yscT,sctT, - CPn0823 sctR,yscR, - CPn0825 yscJ,sctJ, - CPn0828 lpdA, - CPn0833 CPn0831 CPn0834 CPn0830 CPn0829 sctS,yscS,fliQ, - CPn0824 yscL,sctL, - CPn0826 CPn0827 yscT,sctT, - CPn0823 sctR,yscR, - CPn0825 yscJ,sctJ, - CPn0828 lpdA, - CPn0833 CPn0831 CPn0834 CPn0830 CPn0829 yscL,sctL, - CPn0826 CPn0827 yscT,sctT, - CPn0823 sctR,yscR, - CPn0825 yscJ,sctJ, - CPn0828 lpdA, - CPn0833 lipA, - CPn0832 lipA, - CPn0832 sctS,yscS,fliQ, - CPn0824 CPn0831 CPn0834 CPn0829 CPn0830
* Calculated from Protein Sequence

Gene ID: CPn0829

DNA Molecule Name:
1  

Genbank ID:


Gene Name:


Definition:
Chlamydia pneumoniae-specific hypothetical protein

Gene Start:
936744

Gene Stop:
937301

Gene Length:
558

Molecular Weight*:
21484

pI*:
9.90

Net Charge*:
11.08

EC:
 

Functional Class:
unknown; Chlamydia-specific proteins  

Pathway: pathway table

Comment:


Blast Summary:  PSI-Blast Search
No significant hits in gapped BLAST outside of hits to sequences in C.pneumoniae.
No significant similarity to C.trachomatis, T.pallidum, M.genitalium, or U.urealyticum.

COGS Summary:  COGS Search
No hit to the COGs database.

Blocks Summary:  Blocks Search
None.

ProDom Summary:  Protein Domain Search
None.

Paralogs:  Local Blast Search
Several significant hits to hypothetical protein sequences in C.pneumoniae:

Residues 33-180 are 51% similar to residues 16-164 of CPn0830.
Residues 109-184 are 28% similar to residues 48-123 of CPn0221.
Residues 111-174 are 36% similar to residues 54-119 of CPn0226.
Residues 103-173 are 33% similar to residues 44-114 of CPn0223.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

Structural Feature(s):
Feature Type  Start  Stop
transmembrane  
109  
127
transmembrane  
151  
175

PDB Hit:


Gene Protein Sequence:
VPTLAKSFYINIRDSRFYSWLCFIMKETYYRDFLHENYLKNKKSMFMKIY
KTAGEFFLANAKWPLVPAGYRRVRGKDFVLSPLVDLVILFPWVTKDSRYS
PCSMTFTCICRSIVECIPVVSTLFGIGRFCAVWCVEGFSGSTFDKIYHTI
VAVLGILGLGILTFILRIIFSVLMLPVWFLFKCYS$

Gene Nucleotide Sequence:  Sequence Viewer
GTGCCAACTTTGGCGAAATCCTTTTATATAAATATAAGAGATTCAAGGTT
TTATTCATGGCTTTGCTTTATAATGAAGGAAACGTACTACCGCGACTTTC
TTCATGAGAACTATTTGAAAAACAAGAAGAGCATGTTTATGAAAATTTAT
AAAACTGCAGGGGAGTTTTTTTTAGCAAATGCAAAATGGCCCTTGGTACC
GGCTGGGTATCGACGTGTTCGAGGAAAAGATTTTGTTCTATCCCCGCTCG
TGGACTTAGTGATTCTATTTCCTTGGGTAACCAAAGACTCCCGATATTCA
CCTTGCAGCATGACATTCACTTGTATTTGTAGGAGTATAGTAGAGTGTAT
TCCTGTTGTAAGTACATTATTTGGTATCGGACGATTTTGTGCTGTGTGGT
GCGTTGAAGGTTTCTCAGGCTCTACGTTTGATAAGATCTATCATACAATT
GTCGCCGTTCTAGGAATTCTTGGTTTGGGAATTCTTACGTTCATTTTAAG
AATTATTTTTTCTGTGCTTATGTTGCCCGTCTGGTTCTTATTTAAGTGTT
ATTCTTAG


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