Basic Search | Intermediate Search | Advanced SQL Search | Gene Image Map |  Home

Chlamydia pneumoniae Search Results

Record: 1 of 1  
MiniMap IGR651 IGR652 IGR655 IGR649 IGR656 IGR657 IGR650 IGR653 IGR654 sctS,yscS,fliQ, - CPn0824 yscL,sctL, - CPn0826 yscT,sctT, - CPn0823 sctR,yscR, - CPn0825 CPn0818 CPn0822 CPn0820 CPn0821 gspF, - CPn0817 gspD, - CPn0815 sctS,yscS,fliQ, - CPn0824 yscL,sctL, - CPn0826 yscT,sctT, - CPn0823 sctR,yscR, - CPn0825 CPn0818 CPn0822 CPn0820 CPn0821 gspF, - CPn0817 gspD, - CPn0815 sctS,yscS,fliQ, - CPn0824 yscL,sctL, - CPn0826 yscT,sctT, - CPn0823 sctR,yscR, - CPn0825 CPn0822 CPn0821 gspF, - CPn0817 gspD, - CPn0815 CPn0819 gspE, - CPn0816 gspE, - CPn0816 CPn0818 CPn0820 CPn0819
* Calculated from Protein Sequence

Gene ID: CPn0819

DNA Molecule Name:
1  

Genbank ID:


Gene Name:


Definition:
Chlamydia-specific hypothetical protein

Gene Start:
928689

Gene Stop:
929135

Gene Length:
447

Molecular Weight*:
16764

pI*:
8.20

Net Charge*:
3.18

EC:
 

Functional Class:
unknown; Chlamydia-specific proteins  

Pathway: pathway table

Comment:


Blast Summary:  PSI-Blast Search
Single significant hit in gapped BLAST to CT568, a Chlamydia-specific hypothetical protein. Residues 10-146 are 48% similar to CT568.
No significant similarity to T.pallidum, M.genitalium, or U.urealyticum.

COGS Summary:  COGS Search
No hit to the COGs database.

Blocks Summary:  Blocks Search
None.

ProDom Summary:  Protein Domain Search
None.

Paralogs:  Local Blast Search
No paralogs found in C.pneumoniae.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

Structural Feature(s):
Feature Type  Start  Stop
transmembrane  
21  
38

PDB Hit:


Gene Protein Sequence:
LSNIMGSRRKLKRSFLLIEVLMALSLVCAVLLPCIRFYYAIHRSFEEDIF
NLQLPALIDHCFLSVEEKMRQQMAEGTVLTSGKGQTVSLAYTSQGIGYRI
PYGYNVDIRQEVRGDNLKMKVCLADVVVELFPDQKQAVSVQRCLCVTL$

Gene Nucleotide Sequence:  Sequence Viewer
TTGAGTAACATCATGGGGTCTCGACGTAAACTTAAACGTAGCTTTTTACT
TATAGAAGTCCTGATGGCGCTTTCTTTGGTTTGTGCAGTGCTCTTGCCCT
GCATCAGATTTTACTACGCCATCCACAGGTCTTTTGAGGAAGATATTTTT
AATTTGCAATTGCCAGCCCTGATCGACCACTGCTTTCTATCTGTTGAAGA
AAAGATGCGTCAGCAAATGGCAGAAGGAACTGTTCTCACCTCAGGGAAAG
GGCAGACAGTTTCTTTAGCATATACCAGTCAGGGGATAGGCTATCGGATC
CCTTATGGTTACAATGTAGATATCCGTCAGGAAGTCCGTGGTGATAATCT
TAAGATGAAAGTTTGCCTTGCCGATGTTGTTGTGGAACTTTTCCCAGATC
AGAAACAAGCAGTATCCGTACAGAGATGCCTATGTGTAACTCTATAG


Los Alamos National Laboratory     
Operated by the University of California for the National Nuclear Security Administration,
of the US Department of Energy.     Copyright © 2001 UC | Disclaimer/Privacy