Basic Search | Intermediate Search | Advanced SQL Search | Gene Image Map |  Home

Chlamydia pneumoniae Search Results

Record: 1 of 1  
MiniMap IGR632 IGR629 IGR628 IGR631 IGR630 IGR633 IGR627 CPn0799 eno, - CPn0800 rsbU, - CPn0793 CPn0794 CPn0798 CPn0795 CPn0797 CPn0796 CPn0799 eno, - CPn0800 rsbU, - CPn0793 CPn0794 CPn0798 CPn0795 CPn0797 CPn0796 CPn0799 eno, - CPn0800 rsbU, - CPn0793 CPn0794 CPn0798 CPn0795 CPn0797 CPn0796
* Calculated from Protein Sequence

Gene ID: CPn0796

DNA Molecule Name:
1  

Genbank ID:


Gene Name:


Definition:
Chlamydia pneumoniae-specific hypothetical protein

Gene Start:
899301

Gene Stop:
901343

Gene Length:
2043

Molecular Weight*:
72119

pI*:
6.70

Net Charge*:
-2.42

EC:
 

Functional Class:
unknown; Chlamydia pneumoniae-specific proteins  

Pathway: pathway table

Comment:


Blast Summary:  PSI-Blast Search
No significant hits in gapped BLAST outside of hits to sequences in C.pneumoniae.
No significant similarity to C.trachomatis, T.pallidum, M.genitalium, or U.urealyticum.

COGS Summary:  COGS Search
No hit to the COGs database.

Blocks Summary:  Blocks Search
None.

ProDom Summary:  Protein Domain Search
None.

Paralogs:  Local Blast Search
Several significant hits to hypothetical protein sequences in C.pneumoniae:

Residues 50-373 are 40% similar to residues 18-333 of CPn0798.
Residues 335-680 are 32% similar to residues 1-356 of CPn0795.
Residues 37-360 are 36% similar to residues 6-345 of CPn0799.
Residues 77-373 are 36% similar to residues 64-360 of CPn0797.
Residues 52-293 are 32% similar to residues 22-277 of CPn0794.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

Structural Feature(s):
Feature Type  Start  Stop
non-globular  
207  
321

PDB Hit:


Gene Protein Sequence:
LQPCLNMSIVRNSALPLPCLSRSETFKKVRSHMKFMKVLTPWIYRKDLWV
TAFLLTAIPGSFAHTLVDIAGEPRHAAQATGVSGDGKIVIGMKVPDDPFA
ITVGFQYIDGHLQPLEAVRPQCSVYPNGITPDGTVIVGTNYAIGMGSVAV
KWVNGKVSELPMLPDTLDSVASAVSADGRVIGGNRNINLGASVAVKWEDD
VITQLPSLPDAMNACVNGISSDGSIIVGTMVDVSWRNTAVQWIGDQLSVI
GTLGGTTSVASAISTDGTVIVGGSENADSQTHAYAYKNGVMSDIGTLGGF
YSLAHAVSSDGSVIVGVSTNSEHRYHAFQYADGQMVDLGTLGGPESYAQG
VSGDGKVIVGRAQVPSGDWHAFLCPFQAPSPAPVHGGSTVVTSQNPRGMV
DINATYSSLKNSQQQLQRLLIQHSAKVESVSSGAPSFTSVKGAISKQSPA
VQNDVQKGTFLSYRSQVHGNVQNQQLLTGAFMDWKLASAPKCGFKVALHY
GSQDALVERAALPYTEQGLGSSVLSGFGGQVQGRYDFNLGETVVLQPFMG
IQVLHLSREGYSEKNVRFPVSYDSVAYSAATSFMGAHVFASLSPKMSTAA
TLGVERDLNSHIDEFKGSVSAMGNFVLENSTVSVLRPFASLAMYYDVRQQ
QLVTLSVVMNQQPLTGTLSLVSQSSYNLSF$

Gene Nucleotide Sequence:  Sequence Viewer
TTGCAGCCATGTCTGAATATGAGTATAGTCAGAAATTCTGCATTGCCACT
TCCGTGTTTAAGCAGATCCGAAACCTTTAAAAAAGTTAGGTCGCATATGA
AATTTATGAAAGTCCTTACTCCATGGATTTATCGAAAAGATCTTTGGGTA
ACAGCATTCTTACTGACAGCAATTCCAGGATCTTTTGCACATACTCTTGT
TGATATAGCAGGAGAACCTCGGCATGCTGCTCAAGCAACAGGAGTTTCTG
GAGATGGTAAAATTGTTATAGGAATGAAAGTTCCGGATGATCCTTTTGCT
ATAACTGTAGGATTTCAATATATTGATGGGCATTTGCAACCCTTAGAGGC
AGTACGTCCTCAATGCTCTGTATACCCTAATGGTATAACCCCGGACGGAA
CGGTTATTGTGGGTACAAACTATGCCATCGGGATGGGTAGTGTTGCTGTG
AAATGGGTAAATGGCAAGGTTTCTGAACTTCCCATGCTCCCTGACACCCT
CGATTCTGTAGCATCGGCAGTTTCTGCAGATGGAAGAGTGATTGGAGGGA
ATAGAAATATAAATCTTGGCGCTTCTGTTGCTGTGAAATGGGAGGACGAC
GTGATTACACAACTTCCTTCTCTTCCTGATGCTATGAATGCTTGTGTTAA
CGGAATTTCTTCAGATGGTTCTATAATTGTAGGAACCATGGTAGACGTGT
CATGGAGAAATACCGCAGTACAATGGATCGGGGATCAGCTCTCTGTTATT
GGGACTTTAGGAGGAACTACTTCTGTTGCTAGTGCAATCTCAACAGATGG
CACTGTGATTGTAGGAGGTTCTGAAAATGCAGATTCTCAGACTCATGCCT
ATGCTTATAAAAACGGTGTTATGAGCGATATAGGGACCCTCGGAGGTTTT
TATTCTTTAGCACATGCAGTATCTTCAGATGGTTCTGTGATTGTAGGAGT
ATCCACGAACTCTGAGCATAGATATCATGCATTCCAATATGCTGATGGAC
AGATGGTAGATTTAGGAACTTTAGGAGGGCCTGAATCTTATGCTCAAGGT
GTGTCTGGAGATGGAAAGGTAATTGTGGGTAGAGCACAAGTACCATCTGG
AGATTGGCATGCGTTCCTATGTCCTTTCCAAGCTCCGAGCCCTGCTCCTG
TCCATGGGGGAAGCACTGTCGTAACTAGCCAGAATCCACGTGGAATGGTA
GATATCAATGCTACGTACTCCTCTTTGAAAAATAGCCAACAACAACTACA
AAGATTGCTTATCCAGCATAGTGCAAAAGTTGAAAGTGTATCCTCAGGAG
CACCATCTTTTACAAGTGTGAAAGGTGCGATCTCAAAACAGAGCCCTGCA
GTGCAAAATGATGTACAGAAAGGGACGTTTTTAAGTTACCGTTCCCAAGT
TCATGGAAACGTGCAGAATCAGCAATTGCTCACAGGAGCTTTTATGGACT
GGAAACTCGCTTCAGCTCCTAAATGCGGCTTTAAAGTAGCTCTCCACTAT
GGCTCTCAAGATGCTCTCGTAGAACGTGCAGCTCTTCCTTACACAGAACA
AGGCTTAGGAAGCAGTGTCTTGTCAGGTTTTGGAGGACAAGTTCAAGGAC
GCTATGACTTTAATTTAGGAGAAACTGTTGTTCTGCAACCCTTTATGGGC
ATTCAAGTTCTCCACCTAAGTAGAGAAGGGTATTCTGAGAAGAATGTTCG
ATTTCCTGTAAGCTATGATTCTGTAGCCTACTCAGCAGCTACTAGCTTTA
TGGGTGCGCATGTATTTGCCTCCCTAAGCCCTAAAATGAGTACAGCAGCA
ACTTTAGGTGTGGAGAGAGATCTGAATTCACATATAGATGAATTTAAGGG
ATCCGTCTCTGCTATGGGAAACTTTGTCTTGGAAAATTCTACAGTGAGTG
TTTTAAGACCTTTTGCTTCTCTTGCTATGTACTATGACGTAAGACAACAG
CAACTCGTGACGTTGTCAGTAGTTATGAATCAACAACCCTTAACAGGCAC
ACTAAGCTTAGTAAGCCAAAGTAGCTATAATCTTAGCTTCTAA


Los Alamos National Laboratory     
Operated by the University of California for the National Nuclear Security Administration,
of the US Department of Energy.     Copyright © 2001 UC | Disclaimer/Privacy