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Chlamydia pneumoniae Search Results

Record: 1 of 1  
MiniMap IGR541 IGR537 IGR540 IGR535 IGR534 IGR536 IGR533 IGR538 IGR539 CPn0678 CPn0681 fmu, - CPn0674 CPn0677 CPn0675 CPn0676 pgk, - CPn0679 ygo4, - CPn0680 CPn0673 dacC, - CPn0672 CPn0678 CPn0681 fmu, - CPn0674 CPn0677 CPn0675 CPn0676 pgk, - CPn0679 ygo4, - CPn0680 CPn0673 dacC, - CPn0672 Type: tandem, Name:  - 10 CPn0678 CPn0681 fmu, - CPn0674 CPn0677 CPn0675 CPn0676 pgk, - CPn0679 ygo4, - CPn0680 dacC, - CPn0672 CPn0673
* Calculated from Protein Sequence

Gene ID: CPn0677

DNA Molecule Name:
1  

Genbank ID:


Gene Name:


Definition:
Chlamydia pneumoniae-specific hypothetical protein

Gene Start:
760401

Gene Stop:
759253

Gene Length:
1149

Molecular Weight*:
40578

pI*:
8.00

Net Charge*:
2.18

EC:
 

Functional Class:
unknown; Chlamydia-specific proteins  

Pathway: pathway table

Comment:


Blast Summary:  PSI-Blast Search
No significant hits in gapped BLAST outside of hit to probable paralog in C.pneumoniae.
No significant similarity to C.trachomatis, T.pallidum, M.genitalium, or U.urealyticum.

COGS Summary:  COGS Search
No hit to the COGs database.

Blocks Summary:  Blocks Search
None.

ProDom Summary:  Protein Domain Search
None.

Paralogs:  Local Blast Search
Single probable paralogs in C.pneumoniae, a hypothetical protein sequence:

Residues 1-134 are 33% similar to residues 1-179 of CPn0678.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

Structural Feature(s):
Feature Type  Start  Stop
non-globular  
41  
166

PDB Hit:


Gene Protein Sequence:
MGINPSGNRSPDDVWVRGAQGDSSSTQGTGATNSNLGAHNVTTSTSQPQV
ASKAKQLWQTVREFFLGKKSPDSSQGASGPAMQSPSGPTIRPTRPAPPPP
TTGGANAKRPATHGKGRAPQPPTAGSSSGSEQPTAMSSEVAKLVSELKDA
VHSHAESQKVLKKVSQELQTKWTDWENNRGPDYLLHGYRVIARALQQTYT
EQSMLIEGTSSTGPVPQAVTVAKDAVTQTVRGAIKNLENPKPGNDPDGVL
MQVVISLGIEGPTLDPGESIQNFLETRVSDFGGDDSDIDYTSDIARLGSA
LDRVRENHPNEMPRIWIALARELGAAVHSHATSVRIANAGKNHTRDVVRM
ANESSRLLQGMKVLSVGAWANTMTVLIGDLFE$

Gene Nucleotide Sequence:  Sequence Viewer
ATGGGAATCAATCCTTCGGGTAATAGATCACCAGATGATGTATGGGTTAG
AGGAGCTCAAGGCGATAGCTCCAGTACCCAAGGTACAGGAGCTACAAACT
CAAATCTTGGTGCTCACAACGTAACTACATCAACCTCACAGCCGCAAGTT
GCTTCTAAAGCAAAGCAGTTATGGCAGACGGTAAGGGAGTTCTTTTTAGG
GAAGAAATCACCCGATTCTTCTCAGGGTGCTTCGGGACCTGCAATGCAAA
GTCCTTCAGGACCTACAATACGGCCTACGCGTCCGGCACCTCCACCTCCT
ACAACGGGTGGGGCTAATGCGAAACGTCCCGCAACGCATGGGAAAGGTCG
AGCACCTCAACCTCCTACGGCGGGGTCTTCTTCAGGATCAGAGCAACCTA
CTGCCATGAGTTCTGAAGTCGCTAAACTTGTGAGTGAATTAAAAGATGCA
GTCCATAGTCATGCGGAGTCTCAAAAAGTACTTAAAAAGGTATCTCAAGA
GCTACAAACAAAGTGGACGGATTGGGAAAATAATAGGGGTCCAGACTATC
TTTTGCATGGTTATCGTGTCATTGCTCGAGCTTTGCAGCAAACATACACA
GAACAATCTATGCTTATCGAAGGGACTTCATCTACAGGACCAGTTCCGCA
AGCAGTGACTGTAGCTAAGGATGCTGTAACTCAGACAGTTAGAGGCGCAA
TTAAGAATTTAGAAAATCCTAAGCCAGGTAATGATCCTGATGGTGTACTC
ATGCAAGTGGTTATAAGCTTAGGTATCGAAGGACCTACATTAGACCCAGG
AGAATCTATCCAAAACTTTTTAGAAACTAGGGTTTCGGATTTCGGTGGAG
ATGATAGCGACATAGATTATACAAGTGATATAGCTCGATTAGGGTCAGCT
TTAGATCGGGTACGCGAAAATCATCCTAATGAGATGCCTAGAATATGGAT
AGCATTAGCACGAGAACTCGGTGCGGCTGTACACTCTCATGCTACTTCCG
TCCGAATCGCAAATGCAGGAAAGAATCACACTCGTGACGTTGTGCGAATG
GCCAATGAGTCGAGTAGACTACTTCAAGGTATGAAAGTGTTATCGGTCGG
AGCTTGGGCGAATACAATGACAGTTTTAATCGGGGATCTTTTTGAATAA


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