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Chlamydia pneumoniae Search Results

Record: 1 of 1  
MiniMap IGR503 IGR506 IGR510 IGR500 IGR504 IGR508 IGR512 IGR502 IGR509 IGR511 IGR505 IGR501 IGR507 IGR513 IGR515 IGR514 rs17, - CPn0638 rs19, - CPn0643 rl22, - CPn0642 rl23, - CPn0645 rl24, - CPn0636 rl14, - CPn0637 rl18, - CPn0632 rs8, - CPn0634 rl16, - CPn0640 rl5, - CPn0635 rl6, - CPn0633 rs3, - CPn0641 rl4, - CPn0646 rl3, - CPn0647 rl2, - CPn0644 fmt, - CPn0649 CPn0648 rs17, - CPn0638 rs19, - CPn0643 rl22, - CPn0642 rl23, - CPn0645 rl24, - CPn0636 rl14, - CPn0637 rl18, - CPn0632 rs8, - CPn0634 rl16, - CPn0640 rl5, - CPn0635 rl6, - CPn0633 rs3, - CPn0641 rl4, - CPn0646 rl3, - CPn0647 rl2, - CPn0644 fmt, - CPn0649 CPn0648 rl22, - CPn0642 rl23, - CPn0645 rl14, - CPn0637 rs8, - CPn0634 rl5, - CPn0635 rl6, - CPn0633 rs3, - CPn0641 rl4, - CPn0646 rl3, - CPn0647 rl2, - CPn0644 fmt, - CPn0649 CPn0648 rl29, - CPn0639 lpxA, - CPn0650 lpxA, - CPn0650 rl16, - CPn0640 rs17, - CPn0638 rs19, - CPn0643 rl24, - CPn0636 rl18, - CPn0632 rl29, - CPn0639
* Calculated from Protein Sequence

Gene ID: CPn0644

DNA Molecule Name:
1  

Genbank ID:


Gene Name:
rl2  

Definition:
50S ribosomal protein L2

Gene Start:
728573

Gene Stop:
727719

Gene Length:
855

Molecular Weight*:
31351

pI*:
11.30

Net Charge*:
35.49

EC:
 

Functional Class:
translation; ribosomal proteins  

Pathway: pathway table
Molecular Assembly; Ribosome assembly

Comment:
In E.coli the L2 protein binds 23S RNA and has
peptidyltransferase activity.

Blast Summary:  PSI-Blast Search
CPn0644 is similar to TP0192 in T. pallidum,
UU234 in U. urealyticum and MG154 in M. genitalium.

CPn0644 is orthologously related to CT525 and
they share 87% similarity.

COGS Summary:  COGS Search
BeTs to 17 clades of COG0090
COG name: Ribosomal protein L2
Functional Class:  J
The phylogenetic pattern of COG0090 is amtkYqvcebrhujgpolinx
Number of proteins in this genome belonging to this COG is 1

Blocks Summary:  Blocks Search


ProDom Summary:  Protein Domain Search


Paralogs:  Local Blast Search
No evidence of paralogs in C. pneumoniae.

Pfam Summary:  Pfam Search
Residues 53 to 129 (E-value = 1e-44) place CPn0644 in the Ribosomal_L2 family which is described as Ribosomal Proteins L2, RNA binding domain (PF00181)
Residues 135 to 262 (E-value = 1.8e-77) place CPn0644 in the Ribosomal_L2_C family which is described as Ribosomal Proteins L2, C-terminal domain (PF03947)

PDB Hit:


Gene Protein Sequence:
MFKKFKPVTPGTRQLVLPAFDELTTRGELRGTKSKRSLRPNKKLSFFKKS
SGGRDNLGHISCRHRGGGAKQLYRVVDFKRNKDGITAKVVTVEYDPNRSA
YIALLSYEDGEKRYILAPKGIQRGDVVVSGEGSPFKPGCCMTLKSIPLGL
SVHNIEMRPSSGGKLVRSAGLAAQVIAKSPGYVTLKMPSGEFRMLNEGCR
ATIGEVSNADHNLRVDGKAGRRRWMGVRPTVRGTAMNPVDHPHGGGEGRH
NGYIPRTPWGKVTKGLKTRDKNKSNKWIVKDRRK$

Gene Nucleotide Sequence:  Sequence Viewer
ATGTTTAAAAAATTTAAACCAGTAACTCCAGGAACTAGACAGCTGGTCCT
TCCCGCTTTTGATGAGTTAACAACGCGTGGTGAGTTGCGCGGTACGAAGT
CAAAAAGAAGTCTTCGACCAAATAAAAAGCTCTCTTTCTTTAAGAAGAGT
TCTGGTGGAAGAGATAATTTAGGCCATATATCCTGCCGTCATCGTGGCGG
AGGAGCAAAACAATTGTATAGGGTCGTTGACTTCAAACGTAATAAAGATG
GGATTACTGCGAAAGTAGTTACTGTAGAATACGATCCTAATCGTTCTGCA
TACATTGCTCTCTTAAGCTACGAAGACGGAGAAAAACGTTACATTCTCGC
CCCTAAAGGCATCCAAAGGGGAGACGTTGTTGTTTCAGGTGAAGGAAGTC
CATTTAAGCCCGGATGTTGTATGACTTTAAAAAGCATACCTTTAGGATTG
TCAGTTCATAATATTGAAATGCGTCCTTCTTCAGGTGGAAAGCTTGTAAG
ATCTGCTGGATTAGCTGCTCAAGTTATAGCTAAGTCTCCAGGATACGTTA
CTTTAAAGATGCCTTCTGGAGAGTTCCGTATGTTAAATGAGGGATGCAGA
GCTACCATTGGTGAAGTTTCCAATGCCGATCACAACCTACGTGTAGATGG
CAAAGCTGGAAGAAGACGTTGGATGGGAGTTCGTCCTACAGTCCGTGGTA
CTGCAATGAACCCTGTAGATCATCCCCACGGTGGTGGAGAAGGTCGCCAT
AATGGTTATATTCCACGTACACCTTGGGGAAAGGTTACGAAGGGATTAAA
AACACGTGACAAGAACAAAAGTAATAAATGGATTGTTAAAGATCGTAGGA
AATAA


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