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Chlamydia pneumoniae Search Results

Record: 1 of 1  
MiniMap IGR331 IGR328 IGR327 IGR329 IGR330 CPn0405 CPn0407 CPn0404 msbA, - CPn0413 CPn0408 CPn0409 yceC, - CPn0403 CPn0411 fabI, - CPn0406 CPn0405 CPn0407 CPn0404 msbA, - CPn0413 CPn0408 CPn0409 yceC, - CPn0403 CPn0411 fabI, - CPn0406 Type: tandem, Name:  - 6 CPn0405 CPn0407 CPn0404 msbA, - CPn0413 accA, - CPn0414 accA, - CPn0414 yceC, - CPn0403 CPn0411 fabI, - CPn0406 CPn0412 dnaQ, - CPn0410 CPn0412 dnaQ, - CPn0410 CPn0409 CPn0408
* Calculated from Protein Sequence

Gene ID: CPn0408

DNA Molecule Name:
1  

Genbank ID:


Gene Name:


Definition:
Chlamydia-specific hypothetical protein

Gene Start:
454105

Gene Stop:
454584

Gene Length:
480

Molecular Weight*:
18041

pI*:
10.20

Net Charge*:
4.71

EC:
 

Functional Class:
unknown; Chlamydia-specific proteins  

Pathway: pathway table

Comment:


Blast Summary:  PSI-Blast Search
CPn0408 is similar to CT102, a hypothetical protein: residues 12-156 are 47% similar to CT102.

COGS Summary:  COGS Search
No hit to the COGs database.

Blocks Summary:  Blocks Search


ProDom Summary:  Protein Domain Search


Paralogs:  Local Blast Search
No evidence of paralogs in C. pneumoniae.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

Structural Feature(s):
Feature Type  Start  Stop
gram negative signal  
1  
12
transmembrane  
43  
60

PDB Hit:


Gene Protein Sequence:
MFFNLFSLVFKLSDELALAETIQEPISVHEMFPGSMKLEMFKMLGSLILL
LTIFGFGVWAFKKFVRSRSHGFGGSSQIKILERRSLTPKTSIYLIRVVNK
TLVIAETPEKITLLTEFPPDTDINHLLQENNKQSSSSATSDFLSKAIQKI
QKKQQTNQD$

Gene Nucleotide Sequence:  Sequence Viewer
ATGTTTTTTAATCTTTTTTCTTTAGTTTTTAAGCTTTCTGATGAGCTTGC
TCTTGCAGAAACGATCCAAGAGCCCATTTCTGTACATGAAATGTTCCCAG
GAAGCATGAAATTAGAAATGTTTAAAATGCTAGGATCTTTGATTCTACTT
TTAACAATTTTTGGCTTTGGAGTTTGGGCGTTTAAAAAGTTTGTGAGATC
AAGAAGTCACGGTTTTGGAGGCTCGTCTCAAATCAAAATCCTAGAACGAC
GTTCCCTAACGCCGAAAACTTCTATTTACCTCATTCGAGTTGTGAATAAA
ACTCTTGTGATTGCAGAAACACCAGAAAAAATTACGCTACTGACAGAGTT
TCCTCCCGACACTGATATCAATCATCTACTTCAAGAAAATAATAAGCAGT
CTTCTTCCTCTGCAACCTCTGATTTCCTCAGTAAAGCAATACAAAAGATA
CAAAAAAAACAACAGACGAATCAAGATTAG


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