Basic Search | Intermediate Search | Advanced SQL Search | Gene Image Map |  Home

Chlamydia pneumoniae Search Results

Record: 1 of 1  
MiniMap IGR323 IGR326 IGR331 IGR328 IGR327 IGR322 IGR324 IGR329 IGR330 IGR321 CPn0401 CPn0405 CPn0407 CPn0404 mutY, - CPn0402 CPn0398 CPn0408 CPn0399 yceC, - CPn0403 dnaQ, - CPn0410 CPn0400 fabI, - CPn0406 CPn0401 CPn0405 CPn0407 CPn0404 mutY, - CPn0402 CPn0398 CPn0408 CPn0399 yceC, - CPn0403 dnaQ, - CPn0410 CPn0400 fabI, - CPn0406 Type: tandem, Name:  - 6 CPn0401 CPn0405 CPn0407 CPn0404 mutY, - CPn0402 CPn0399 yceC, - CPn0403 CPn0400 fabI, - CPn0406 CPn0409 CPn0408 dnaQ, - CPn0410 CPn0398 CPn0409
* Calculated from Protein Sequence

Gene ID: CPn0404

DNA Molecule Name:
1  

Genbank ID:


Gene Name:


Definition:
Chlamydia-specific hypothetical protein

Gene Start:
450887

Gene Stop:
449868

Gene Length:
1020

Molecular Weight*:
37068

pI*:
5.30

Net Charge*:
-6.35

EC:
 

Functional Class:
unknown; Chlamydia-specific proteins  

Pathway: pathway table

Comment:


Blast Summary:  PSI-Blast Search
CPn0404 is weakly similar to CT105, a hypothetical protein: residues 13-165 are 22% similar to residues 402-555 of CT105.

COGS Summary:  COGS Search
No hit to the COGs database.

Blocks Summary:  Blocks Search


ProDom Summary:  Protein Domain Search


Paralogs:  Local Blast Search
No evidence of paralogs in C. pneumoniae.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

Structural Feature(s):
Feature Type  Start  Stop
non-globular  
248  
339

PDB Hit:


Gene Protein Sequence:
MSLLSGHRLEGFPPIAEVMAACDRCSMDFCEILKSQSMDLWADAASCVDG
LLQDPFWSTAIASGIAKSSLQETEFECESKVMVLSSWGEQGAQVCSPFNL
ERICMSFPSLKVFSLKKNGCENMGIQLSASCMNLLMSIFFVATNGGSTPI
WITKENLMALVALVLSHYQCYFVPATGDPQRGNILGNPEVNAILARGMGM
RVDLERKRGGESSSSRYLELAARCFENSLTKTSLLSDANNVQERDKCLLQ
MSTSLMHTAGLNLQRPPVPTPSGVTAHPQPQPDPVVTSQPSLLGARERSP
VSSRGRFPVVLPLSVISPRSHPGRVERRDLEDEEEEVMF$

Gene Nucleotide Sequence:  Sequence Viewer
ATGAGCTTATTATCAGGACATCGACTCGAGGGATTTCCTCCAATCGCGGA
GGTCATGGCTGCATGTGACCGGTGTTCTATGGACTTTTGTGAGATCTTGA
AGTCTCAAAGCATGGATCTGTGGGCGGATGCGGCGAGTTGTGTGGATGGT
TTATTACAGGATCCTTTTTGGAGTACAGCAATTGCCTCAGGGATTGCTAA
GTCTTCTCTTCAGGAAACGGAATTCGAGTGTGAAAGCAAAGTGATGGTTC
TTTCTTCATGGGGAGAGCAAGGAGCACAGGTTTGTAGCCCTTTTAACCTA
GAGAGGATATGTATGTCTTTCCCATCACTTAAGGTCTTCTCCCTTAAAAA
GAACGGGTGCGAGAACATGGGAATCCAGTTGTCTGCATCCTGCATGAATC
TATTAATGTCTATTTTCTTTGTAGCTACCAATGGAGGAAGCACTCCGATT
TGGATCACCAAAGAAAATCTGATGGCGTTAGTTGCTTTGGTTTTATCTCA
CTATCAATGTTATTTTGTCCCAGCCACAGGAGATCCCCAACGTGGCAACA
TTTTAGGTAATCCAGAAGTCAATGCTATTTTGGCTCGGGGGATGGGCATG
CGTGTCGATCTGGAAAGGAAGCGAGGGGGAGAATCTTCCTCGTCACGCTA
TTTAGAATTAGCTGCACGATGTTTTGAGAATTCTCTTACGAAAACAAGTT
TGTTAAGCGATGCTAACAATGTTCAAGAAAGAGATAAGTGCCTACTACAG
ATGTCAACTTCATTGATGCATACGGCGGGACTAAATTTACAACGCCCCCC
TGTACCCACACCTTCTGGAGTCACGGCACATCCGCAACCTCAACCAGATC
CTGTGGTTACGTCTCAACCTTCTTTATTAGGTGCTAGAGAGCGTTCCCCT
GTGTCTTCTAGAGGGCGTTTTCCTGTAGTTTTACCTTTAAGTGTGATTTC
TCCTAGGTCGCACCCCGGAAGGGTAGAAAGGCGGGATTTAGAAGATGAAG
AAGAGGAGGTTATGTTTTGA


Los Alamos National Laboratory     
Operated by the University of California for the National Nuclear Security Administration,
of the US Department of Energy.     Copyright © 2001 UC | Disclaimer/Privacy