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Chlamydia pneumoniae Search Results

Record: 1 of 1  
MiniMap IGR288 IGR292 IGR285 IGR284 IGR286 IGR291 IGR287 IGR289 IGR290 CPn0358 CPn0356 CPn0357 tyrS, - CPn0361 CPn0355 gnd, - CPn0360 CPn0353 CPn0352 CPn0354 lepA, - CPn0359 CPn0358 CPn0356 CPn0357 tyrS, - CPn0361 CPn0355 gnd, - CPn0360 CPn0353 CPn0352 CPn0354 lepA, - CPn0359 CPn0358 CPn0357 tyrS, - CPn0361 CPn0355 gnd, - CPn0360 CPn0356 CPn0353 CPn0352 CPn0354 lepA, - CPn0359
* Calculated from Protein Sequence

Gene ID: CPn0357

DNA Molecule Name:
1  

Genbank ID:


Gene Name:


Definition:
Chlamydia pneumoniae-specific hypothetical protein

Gene Start:
401317

Gene Stop:
400466

Gene Length:
852

Molecular Weight*:
32493

pI*:
5.90

Net Charge*:
-5.25

EC:
 

Functional Class:
unknown; Chlamydia pneumoniae-specific proteins  

Pathway: pathway table

Comment:


Blast Summary:  PSI-Blast Search
No significant hits in gapped BLAST outside of sequences in C.pneumoniae.
No significant similarity to C.trachomatis, T.pallidum, M.genitalium, or U.urealyticum.

COGS Summary:  COGS Search
No hit to the COGs database.

Blocks Summary:  Blocks Search
None.

ProDom Summary:  Protein Domain Search
None.

Paralogs:  Local Blast Search
Several significant hits to hypothetical protein sequences in C.pneumoniae:

Residues 26-253 are 26% similar to residues 22-266 of CPn0355.
Residues 28-283 are 24% similar to residues 31-280 of CPn0352.
Residues 1-283 are 22% similar to residues 1-328 of CPn0354.

Pfam Summary:  Pfam Search
Residues 2 to 283 (E-value = 3.5e-08) place CPn0357 in the DUF1389 family which is described as Protein of unknown function (DUF1389) (PF07146)

Structural Feature(s):
Feature Type  Start  Stop
non-globular  
1  
71

PDB Hit:


Gene Protein Sequence:
MVNIQPVYRNTQVNYSQATQFSVCQPALSLIIVSVVAAVLAIVALVCSQS
LLSIELGTALVLVSLILFASAMFMIYKMRQEPKELLIPKKIMELIQEHYP
SIVVDFIRDQEVSIYEIHHLISILNKTNVFDKAPVYLQEKLLQFGIEKFK
DVHPSKLPNFEEILLQHCPLHWLGRLVYPMVSDVTPGTYGYYWCGPLGLY
ENAPSLFERRSLLLLKKISFGEFALLEDGLKKNTWSSSELVQIRQNLFTR
YYADKEEVDEAELNADYEQFDSLLHLIFSHKLS$

Gene Nucleotide Sequence:  Sequence Viewer
ATGGTTAATATACAGCCTGTGTATAGGAATACCCAAGTCAACTATAGTCA
GGCTACCCAATTTTCGGTGTGCCAGCCAGCGCTTAGCCTGATTATCGTTT
CTGTTGTTGCTGCTGTACTCGCTATTGTAGCTTTGGTATGCAGTCAATCT
CTTTTATCCATAGAGTTAGGAACTGCTCTTGTTCTAGTTTCTCTTATTCT
TTTTGCTTCTGCTATGTTTATGATTTATAAGATGAGACAAGAACCTAAGG
AGTTGCTGATCCCTAAGAAAATCATGGAACTCATCCAAGAACATTATCCA
AGTATTGTTGTTGATTTTATTAGAGATCAGGAGGTTTCCATTTATGAGAT
ACATCACTTGATCTCTATTCTTAATAAGACGAATGTTTTCGACAAAGCAC
CAGTATATTTACAAGAAAAACTCTTACAGTTTGGCATTGAGAAGTTCAAA
GATGTACATCCAAGTAAGCTCCCTAATTTTGAAGAAATTCTTCTACAGCA
TTGCCCATTGCATTGGTTGGGACGTCTGGTATATCCCATGGTATCGGATG
TCACTCCAGGAACCTATGGATACTATTGGTGTGGTCCTTTAGGACTGTAC
GAGAACGCTCCCTCTCTTTTTGAACGTCGATCTCTTCTATTGTTAAAGAA
AATTAGCTTTGGAGAGTTTGCTCTTTTAGAAGATGGTCTCAAGAAAAACA
CGTGGAGTTCTTCGGAACTCGTTCAAATCAGACAAAACCTTTTTACAAGA
TATTATGCTGATAAAGAAGAGGTAGATGAAGCAGAGTTAAACGCTGATTA
CGAACAGTTTGATTCCCTCCTTCACCTTATTTTTTCTCACAAGCTCTCTT
GA


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