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Chlamydia pneumoniae Search Results

Record: 1 of 1  
MiniMap IGR206 IGR199 IGR205 IGR198 IGR197 IGR204 IGR201 IGR202 IGR207 IGR200 IGR203 rs9, - CPn0246 CPn0243 CPn0242 rl13, - CPn0247 ycfV, - CPn0248 CPn0241 CPn0240 yqgF, - CPn0237 adk, - CPn0244 nagB  zwf,devB, - CPn0239 ydhO, - CPn0245 zwf, - CPn0238 rs9, - CPn0246 CPn0243 CPn0242 rl13, - CPn0247 ycfV, - CPn0248 CPn0241 CPn0240 yqgF, - CPn0237 adk, - CPn0244 nagB  zwf,devB, - CPn0239 ydhO, - CPn0245 zwf, - CPn0238 rs9, - CPn0246 CPn0242 ycfV, - CPn0248 CPn0241 CPn0240 CPn0243 rl13, - CPn0247 yqgF, - CPn0237 adk, - CPn0244 nagB  zwf,devB, - CPn0239 ydhO, - CPn0245 zwf, - CPn0238
* Calculated from Protein Sequence

Gene ID: CPn0241

DNA Molecule Name:
1  

Genbank ID:


Gene Name:


Definition:
Chlamydia-specific hypothetical protein

Gene Start:
279354

Gene Stop:
278200

Gene Length:
1155

Molecular Weight*:
41786

pI*:
6.60

Net Charge*:
-2.49

EC:
 

Functional Class:
unknown; Chlamydia-specific proteins  

Pathway: pathway table

Comment:


Blast Summary:  PSI-Blast Search
No significant hits in gapped BLAST outside of sequences in C.pneumoniae.
No significant similarity to C.trachomatis, T.pallidum, M.genitalium, or U.urealyticum.

COGS Summary:  COGS Search
No hit to the COGs database.

Blocks Summary:  Blocks Search
None.

ProDom Summary:  Protein Domain Search
None.

Paralogs:  Local Blast Search
Single hit to a hypothetical protein and probable paralog in C.pneumoniae: residues 114-320 are 36% similar to residues 105-309 of CPn0240.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

Structural Feature(s):
Feature Type  Start  Stop
gram negative signal  
1  
13
transmembrane  
117  
141
transmembrane  
178  
195
transmembrane  
200  
224
transmembrane  
234  
258
transmembrane  
280  
297
non-globular  
325  
384

PDB Hit:


Gene Protein Sequence:
MSAMISLSSSHEASIASNTQVRDVLVSLAMDEFVEHNTEILPIKVFLARG
TLSSTAIIDDLKDVVETEGEHHFQVYSNISLKMIYQRFFEKIFGIGCCPL
LLVTDSHHTDPCGALITGIFAAVLFTVLAIVFGPTLGILCYSAYKIYQLT
KKISSLSRTHTEVINSVQKSDPFIHRSGAVAAAAASQSTIKACKVFRQST
LIFFVLGLIITISLAALIVGLVFALFFLDPGAPAVMTAAMIGCCAAGGTG
ILLSVIGFLLASVYSVQKSQEGVHHMHTALLRCIVSNTIIQMPYLPITPG
TKKVLTQSIRRYQQFFSDDEYRDIESEVPLNRQTTPPPSYETLFHEEGSD
GSSNVIPRESPPAYSTIDSSNSPFPSSSPPPYYR$

Gene Nucleotide Sequence:  Sequence Viewer
ATGTCTGCCATGATTTCTCTTTCTTCTTCACATGAGGCAAGCATTGCTTC
TAATACACAGGTCCGCGACGTCCTAGTATCTTTAGCTATGGACGAATTTG
TTGAACATAACACAGAGATTCTTCCGATTAAAGTATTCCTAGCCCGAGGA
ACACTTTCGTCAACTGCTATTATAGATGATTTGAAAGATGTAGTAGAGAC
AGAAGGCGAACATCACTTTCAAGTGTATTCTAATATCAGCTTGAAAATGA
TTTATCAGAGATTTTTTGAAAAAATATTTGGAATAGGGTGTTGTCCCCTG
TTGTTAGTGACAGATTCTCATCACACTGATCCCTGTGGAGCACTCATAAC
CGGTATTTTCGCAGCTGTCCTCTTTACAGTCTTAGCTATTGTGTTCGGGC
CTACACTAGGCATTTTGTGCTACTCTGCATATAAAATTTATCAACTTACC
AAGAAAATATCCTCTTTATCAAGAACCCACACTGAGGTCATAAATTCCGT
ACAGAAATCAGATCCTTTTATACATCGTTCAGGGGCTGTAGCCGCCGCTG
CCGCCTCACAATCTACAATCAAGGCTTGTAAAGTATTTAGACAATCCACA
TTAATTTTCTTTGTGCTTGGCTTAATTATTACGATATCTTTAGCAGCTTT
AATTGTAGGCCTTGTTTTTGCTCTATTTTTTTTAGATCCTGGAGCTCCTG
CTGTAATGACCGCAGCAATGATAGGATGCTGTGCTGCAGGAGGAACAGGA
ATCCTCCTCTCTGTAATAGGCTTTTTACTTGCTTCTGTGTATAGCGTGCA
GAAAAGCCAAGAAGGTGTTCATCATATGCATACCGCACTATTGCGTTGTA
TAGTGAGTAACACAATTATTCAGATGCCCTACCTTCCTATCACTCCAGGA
ACTAAAAAAGTGCTTACTCAGTCTATACGAAGATACCAACAGTTCTTCAG
TGATGACGAGTATAGAGATATCGAGAGCGAAGTCCCCTTGAACCGTCAGA
CGACGCCACCTCCAAGTTACGAGACTCTGTTTCATGAGGAGGGGAGCGAT
GGTAGCAGCAACGTGATTCCTAGAGAATCTCCACCGGCCTATTCTACGAT
AGACTCGTCGAATTCTCCTTTTCCCTCTTCTTCTCCTCCTCCTTATTATC
GCTAA


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