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Chlamydia pneumoniae Search Results

Record: 1 of 1  
MiniMap IGR145 IGR135 IGR140 IGR139 IGR142 IGR138 IGR141 IGR144 IGR136 IGR137 IGR143 CPn0168 CPn0167 imdH,guaB, - CPn0172 CPn0169 CPn0161 CPn0170 CPn0162 guaA, - CPn0171 pfpA, - CPn0160 CPn0166 CPn0163 CPn0165 CPn0168 CPn0167 imdH,guaB, - CPn0172 CPn0169 CPn0161 CPn0170 CPn0162 guaA, - CPn0171 pfpA, - CPn0160 CPn0166 CPn0163 CPn0165 CPn0167 imdH,guaB, - CPn0172 CPn0169 CPn0161 CPn0170 CPn0162 guaA, - CPn0171 pfpA, - CPn0160 CPn0168 CPn0164 CPn0163 CPn0165 CPn0164 CPn0166
* Calculated from Protein Sequence

Gene ID: CPn0166

DNA Molecule Name:
1  

Genbank ID:


Gene Name:


Definition:
Chlamydia pneumoniae-specific hypothetical protein

Gene Start:
207630

Gene Stop:
207965

Gene Length:
336

Molecular Weight*:
12121

pI*:
4.90

Net Charge*:
-2.87

EC:
 

Functional Class:
unknown; Chlamydia pneumoniae-specific proteins  

Pathway: pathway table

Comment:
Appears to be C. pneumoniae-specific.

Blast Summary:  PSI-Blast Search
No significant hits in gapped BLAST outside of sequences in C.pneumoniae. No significant similarity to C.trachomatis, T.pallidum, M.genitalium, or U.urealyticum.

COGS Summary:  COGS Search
No hit to the COGs database.

Blocks Summary:  Blocks Search
None.

ProDom Summary:  Protein Domain Search
None.

Paralogs:  Local Blast Search
Few significant hits to hypothetical protein sequences in C.pneumoniae:

Residues 7-80 are 54% similar to residues 2-78 of CPn0169.
Residues 21-79 are 45% similar to residues 26-85 of CPn0164.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

Structural Feature(s):
Feature Type  Start  Stop
transmembrane  
33  
55
transmembrane  
60  
79

PDB Hit:


Gene Protein Sequence:
MSESINRSIHLEASTPFFIKLTNLCESRLVKITSLVISLLALVGAGVTLV
VLFVAGILPLLPVLILEIILITVLVLLFCLVLEPYLIEKPSKIKELPKVD
ELSVVETDSTL$

Gene Nucleotide Sequence:  Sequence Viewer
ATGTCTGAAAGTATTAACAGAAGCATTCATTTAGAAGCCTCTACACCATT
TTTTATAAAATTAACGAATCTCTGTGAAAGTAGATTAGTTAAGATCACTT
CTCTTGTTATTTCTCTATTAGCTTTAGTGGGTGCGGGAGTCACTCTTGTG
GTTTTATTTGTAGCTGGGATCCTTCCTTTACTTCCTGTACTCATCTTAGA
AATTATTTTAATAACCGTCCTTGTCTTGCTTTTTTGTTTGGTATTGGAAC
CTTATTTAATAGAAAAACCTAGTAAAATAAAGGAACTACCTAAAGTAGAC
GAGCTATCTGTAGTAGAAACGGACAGTACTCTTTAA


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