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Chlamydia pneumoniae Search Results

Record: 1 of 1  
MiniMap IGR135 IGR140 IGR139 IGR142 IGR138 IGR141 IGR144 IGR136 IGR137 IGR143 CPn0168 CPn0167 CPn0169 CPn0161 CPn0170 CPn0162 guaA, - CPn0171 pfpA, - CPn0160 CPn0166 CPn0163 CPn0165 CPn0168 CPn0167 CPn0169 CPn0161 CPn0170 CPn0162 guaA, - CPn0171 pfpA, - CPn0160 CPn0166 CPn0163 CPn0165 CPn0167 CPn0169 CPn0161 CPn0170 CPn0162 guaA, - CPn0171 pfpA, - CPn0160 CPn0168 CPn0164 CPn0163 CPn0165 CPn0164 CPn0166
* Calculated from Protein Sequence

Gene ID: CPn0165

DNA Molecule Name:
1  

Genbank ID:


Gene Name:


Definition:
Chlamydia pneumoniae-specific hypothetical protein

Gene Start:
206998

Gene Stop:
207585

Gene Length:
588

Molecular Weight*:
23022

pI*:
7.30

Net Charge*:
1.12

EC:
 

Functional Class:
unknown; Chlamydia pneumoniae-specific proteins  

Pathway: pathway table

Comment:
Appears to be C. pneumoniae-specific.

Blast Summary:  PSI-Blast Search
No significant hits in gapped BLAST outside of sequences in C.pneumoniae. No significant similarity to C.trachomatis, T.pallidum, M.genitalium, or U.urealyticum.

COGS Summary:  COGS Search
No hit to the COGs database.

Blocks Summary:  Blocks Search
None.

ProDom Summary:  Protein Domain Search
None.

Paralogs:  Local Blast Search
Several hits to hypothetical proteins in C.pneumoniae:

Residues 1-101 are 71% similar to residues 163-264 of CPn0169.
Residues 2-193 are 34% similar to residues 168-365 of CPn0067.
Residues 124-195 are 54% similar to residues 1-75 of CPn0168.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

PDB Hit:


Gene Protein Sequence:
MNWVPKTIDHVDPESEIDIRKVVSCYKLIKECQPEFRSLISELLGVIRCG
LRLLKRSKYQEQARTVSDEDAPLFCLTRSYYQDGYLTPLRAGPRDLINHY
IHLRRRENPKHFFSPKHPCYYARLAFNESVCVYRELFDIERLTKMYVEGD
YSKEQEKNLQAILSFVKTLDEGKDFLIEHKDTDLIGRGFTDVFCT$

Gene Nucleotide Sequence:  Sequence Viewer
ATGAATTGGGTTCCAAAAACAATAGACCATGTAGATCCAGAATCAGAGAT
AGATATACGTAAAGTCGTCTCCTGCTATAAGTTGATAAAAGAATGTCAAC
CTGAATTTCGATCTCTTATAAGTGAATTACTAGGAGTGATTCGGTGTGGC
TTAAGACTATTAAAACGTTCTAAGTATCAAGAACAGGCTAGAACTGTATC
TGATGAAGATGCACCTCTTTTCTGCCTGACTCGTTCTTATTATCAAGATG
GTTATCTCACGCCATTAAGAGCAGGACCTCGTGATCTTATAAATCACTAT
ATACACTTGCGTCGCCGAGAGAATCCTAAGCATTTTTTCAGTCCTAAGCA
TCCATGTTATTATGCTCGATTGGCTTTTAATGAGTCAGTGTGTGTCTATA
GAGAACTCTTTGATATAGAGCGACTTACAAAAATGTATGTCGAGGGTGAT
TATTCTAAAGAACAAGAGAAAAACCTACAGGCTATTCTTAGTTTTGTGAA
AACTCTAGATGAAGGAAAGGACTTTCTTATTGAACATAAAGATACCGATC
TCATTGGGAGAGGTTTTACTGATGTGTTCTGCACTTAA


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