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Chlamydia pneumoniae Search Results

Record: 1 of 1  
MiniMap IGR135 IGR140 IGR139 IGR142 IGR138 IGR141 IGR144 IGR136 IGR137 IGR134 IGR143 CPn0168 CPn0159 CPn0167 CPn0169 CPn0161 CPn0170 CPn0162 guaA, - CPn0171 pfpA, - CPn0160 CPn0166 CPn0163 CPn0165 CPn0168 CPn0159 CPn0167 CPn0169 CPn0161 CPn0170 CPn0162 guaA, - CPn0171 pfpA, - CPn0160 CPn0166 CPn0163 CPn0165 Type: tandem, Name:  - 2 CPn0159 CPn0167 CPn0169 CPn0161 CPn0170 CPn0162 guaA, - CPn0171 pfpA, - CPn0160 CPn0168 CPn0164 CPn0163 CPn0165 CPn0164 CPn0166
* Calculated from Protein Sequence

Gene ID: CPn0164

DNA Molecule Name:
1  

Genbank ID:


Gene Name:


Definition:
Chlamydia pneumoniae-specific hypothetical protein

Gene Start:
206498

Gene Stop:
207001

Gene Length:
504

Molecular Weight*:
18705

pI*:
10.10

Net Charge*:
8.99

EC:
 

Functional Class:
unknown; Chlamydia pneumoniae-specific proteins  

Pathway: pathway table

Comment:
Appears to be C. pneumoniae-specific.

Blast Summary:  PSI-Blast Search
No significant hits in gapped BLAST outside of sequences in C.pneumoniae. No significant similarity to C.trachomatis, T.pallidum, M.genitalium, or U.urealyticum.

COGS Summary:  COGS Search
No hit to the COGs database.

Blocks Summary:  Blocks Search
None.

ProDom Summary:  Protein Domain Search
None.

Paralogs:  Local Blast Search
Several significant hits to hypothetical protein sequences in C.pneumoniae:

Residues 11-156 are 51% similar to residues 6-151 of CPn0169.
Residues 6-147 are 30% similar to residues 7-145 of CPn0067.
Residues 26-85 are 45% similar to residues 21-79 of CPn0166.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

Structural Feature(s):
Feature Type  Start  Stop
non-globular  
1  
87

PDB Hit:


Gene Protein Sequence:
MTRSTIESSDSLCSRSFSQKLSVQTLKNLCESRLMKITSLVIAFLTLIVG
GALIALAGGGVLSFPLGLILGSVLVLFSSIYLVSCCKFFTLKEMTMTCSV
KSKINIWFEKQRNKDIEKALENPDLFGENKRNVGNRSARNQLEMILHETD
GIILKRYMKGAKMYFYL$

Gene Nucleotide Sequence:  Sequence Viewer
ATGACTAGAAGTACTATTGAAAGCAGTGATTCGCTATGCTCAAGGTCTTT
TTCTCAAAAATTAAGTGTCCAGACATTAAAAAATCTCTGTGAAAGTAGAT
TAATGAAGATCACTTCTCTTGTGATTGCTTTCCTAACTCTAATTGTGGGG
GGTGCTCTTATAGCTTTAGCAGGAGGGGGGGTTCTTTCTTTCCCTCTTGG
GCTAATCTTAGGAAGCGTACTCGTTTTGTTTTCTTCTATCTATTTAGTCT
CTTGTTGTAAATTTTTTACTTTAAAAGAGATGACAATGACCTGTAGTGTC
AAATCTAAAATCAATATATGGTTTGAAAAGCAACGAAACAAAGACATCGA
AAAGGCATTAGAGAATCCAGATCTCTTTGGAGAAAATAAGAGAAATGTTG
GAAATCGTTCGGCAAGAAATCAACTAGAAATGATCTTACACGAGACTGAC
GGAATTATTTTGAAAAGATATATGAAAGGAGCTAAAATGTACTTTTATTT
ATGA


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