Basic Search | Intermediate Search | Advanced SQL Search | Gene Image Map |  Home

Chlamydia pneumoniae Search Results

Record: 1 of 1  
MiniMap IGR14 IGR15 IGR16 IGR13 yjjK, - CPn0023 CPn0021 CPn0020 yjjK, - CPn0023 CPn0021 CPn0020 yjjK, - CPn0023 CPn0021 CPn0020 maf, - CPn0022 maf, - CPn0022
* Calculated from Protein Sequence

Gene ID: CPn0020

DNA Molecule Name:
1  

Genbank ID:


Gene Name:


Definition:
Chlamydia-specific hypothetical protein (predicted OMP)

Gene Start:
32687

Gene Stop:
30600

Gene Length:
2088

Molecular Weight*:
80247

pI*:
8.90

Net Charge*:
18.39

EC:
 

Functional Class:
unknown; Chlamydia-specific proteins  

Pathway: pathway table

Comment:


Blast Summary:  PSI-Blast Search
CPn0020 is orthologously related to CT351, a hypothetical protein: residues 1-692 are 61% similar to CT351.

COGS Summary:  COGS Search
No hit to the COGs database.

Blocks Summary:  Blocks Search


ProDom Summary:  Protein Domain Search


Paralogs:  Local Blast Search
No evidence of paralogs in C. pneumoniae.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

Structural Feature(s):
Feature Type  Start  Stop
gram negative signal  
1  
20
non-globular  
118  
241

PDB Hit:


Gene Protein Sequence:
MKRCFLFLASFVLMGSSADALTHQEAVKKKNSYLSHFKSVSGIVTIEDGV
LNIHNNLRIQANKVYVENTVGQSLKLVAHGNVMVNYRAKTLVCDYLEYYE
DTDSCLLTNGRFAMYPWFLGGSMITLTPETIVIRKGYISTSEGPKKDLCL
SGDYLEYSSDSLLSIGKTTLRVCRIPILFLPPFSIMPMEIPKPPINFRGG
TGGFLGSYLGMSYSPISRKHFSSTFFLDSFFKHGVGMGFNLHCSQKQVPE
NVFNMKSYYAHRLAIDMAEAHDRYRLHGDFCFTHKHVNFSGEYHLSDSWE
TVADIFPNNFMLKNTGPTRVDCTWNDNYFEGYLTSSVKVNSFQNANQELP
YLTLRQYPISIYNTGVYLENIVECGYLNFAFSDHIVGENFSSLRLAARPK
LHKTVPLPIGTLSSTLGSSLIYYSDVPEISSRHSQLSAKLQLDYRFLLHK
SYIQRRHIIEPFVTFITETRPLAKNEDHYIFSIQDAFHSLNLLKAGIDTS
VLSKTNPRFPRIHAKLWTTHILSNTESKPTFPKTACELSLPFGKKNTVSL
DAEWIWKKHCWDHMNIRWEWIGNDNVAMTLESLHRSKYSLIKCDRENFIL
DVSRPIDQLLDSPLSDHRNLILGKLFVRPHPCWNYRLSLRYGWHRQDTPN
YLEYQMILGTKIFEHWQLYGVYERREADSRFFFFLKLDKPKKPPF$

Gene Nucleotide Sequence:  Sequence Viewer
ATGAAACGTTGCTTCTTATTTCTAGCTTCCTTTGTTCTTATGGGTTCCTC
AGCTGATGCTTTGACTCATCAAGAGGCTGTGAAAAAGAAAAACTCCTATC
TTAGTCACTTTAAGAGTGTTTCTGGGATTGTGACCATCGAAGATGGGGTA
TTGAATATCCATAACAACCTGCGGATACAAGCCAATAAAGTGTATGTAGA
AAATACTGTGGGTCAAAGCCTGAAGCTTGTCGCACATGGCAATGTTATGG
TGAACTATAGGGCAAAAACCCTAGTTTGTGATTACCTAGAGTATTACGAA
GATACAGACTCTTGTCTTCTTACTAATGGAAGATTCGCGATGTATCCTTG
GTTTCTAGGGGGGTCTATGATCACTCTAACCCCAGAAACCATAGTCATTC
GGAAGGGATATATCTCTACCTCCGAGGGTCCCAAAAAAGACCTGTGCCTC
TCCGGAGATTACCTGGAATATTCTTCAGATAGTCTTCTTTCTATAGGGAA
GACAACATTAAGGGTGTGTCGCATTCCGATACTTTTCTTACCTCCATTTT
CTATCATGCCTATGGAGATCCCTAAGCCTCCGATAAACTTTCGAGGAGGA
ACAGGAGGATTTCTGGGATCCTATTTGGGGATGAGCTACTCGCCGATTTC
TAGGAAGCATTTCTCCTCGACATTTTTCTTGGATAGCTTTTTCAAGCATG
GCGTCGGCATGGGATTCAACCTCCATTGTTCTCAGAAGCAGGTTCCTGAG
AATGTCTTCAATATGAAAAGCTATTATGCCCACCGCCTTGCTATCGATAT
GGCAGAAGCTCATGATCGCTATCGCCTACACGGAGATTTCTGCTTCACGC
ATAAGCATGTAAATTTTTCTGGAGAATACCATCTCAGCGATAGTTGGGAA
ACTGTTGCTGACATTTTCCCCAACAACTTCATGTTGAAAAATACAGGCCC
CACACGTGTCGATTGCACTTGGAATGACAACTATTTTGAAGGGTATCTCA
CCTCTTCTGTTAAGGTAAACTCTTTCCAAAATGCCAACCAAGAGCTCCCT
TATTTAACATTAAGGCAGTACCCGATTTCTATTTATAATACGGGAGTGTA
CCTTGAAAACATCGTAGAATGTGGGTATTTAAACTTTGCTTTTAGCGATC
ATATCGTTGGCGAGAATTTCTCTTCACTACGTCTTGCTGCGCGCCCTAAG
CTCCATAAAACTGTGCCTCTACCTATAGGAACGCTCTCCTCCACCCTAGG
GAGTTCTCTGATTTACTATAGCGATGTTCCTGAGATCTCCTCGCGCCATA
GTCAGCTTTCCGCGAAGCTACAACTTGATTATCGCTTTCTATTACATAAG
TCCTACATTCAAAGACGCCATATTATAGAGCCGTTCGTTACCTTCATTAC
AGAGACTCGTCCTCTAGCTAAGAATGAAGATCATTATATCTTTTCTATTC
AAGATGCCTTTCACTCCTTAAACCTTCTGAAAGCGGGTATAGATACCTCG
GTACTGAGTAAGACTAACCCTCGATTCCCGAGAATCCATGCGAAGCTGTG
GACTACCCACATCTTGAGCAATACAGAAAGCAAACCCACGTTTCCCAAAA
CTGCATGCGAGCTATCTCTACCTTTTGGAAAGAAAAATACAGTCTCCTTA
GATGCTGAATGGATTTGGAAAAAGCACTGTTGGGATCACATGAACATACG
TTGGGAGTGGATCGGAAATGACAATGTGGCTATGACTCTAGAATCCCTGC
ATAGAAGCAAATACAGCCTGATTAAGTGTGACAGGGAGAACTTCATTTTA
GATGTCAGCCGTCCCATTGACCAGCTTTTAGACTCCCCTCTCTCTGATCA
TAGGAATCTCATTTTAGGGAAATTATTTGTACGACCTCATCCCTGTTGGA
ATTACCGCTTATCCTTACGCTATGGCTGGCATCGCCAGGACACTCCGAAC
TACCTAGAATACCAGATGATTCTAGGGACGAAGATCTTCGAACATTGGCA
GCTCTATGGGGTGTATGAACGCCGAGAAGCAGATAGTCGATTTTTCTTCT
TCTTAAAGCTCGACAAACCTAAAAAACCTCCCTTCTAA


Los Alamos National Laboratory     
Operated by the University of California for the National Nuclear Security Administration,
of the US Department of Energy.     Copyright © 2001 UC | Disclaimer/Privacy