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Chlamydia trachomatis Search Results

Record: 1 of 1  
MiniMap tRNA-Leu-4 IGR442 IGR438 IGR445 IGR444 IGR440 IGR439 IGR441 IGR446 IGR443 spoU,yibK, - CT540 fabZ, - CT532 vldD,yciA, - CT535 CT538 mip, - CT541 dnaQ, - CT536 lpxC, - CT533 fmt, - CT530 cutE,lnt, - CT534 aspS, - CT542 trxA, - CT539 spoU,yibK, - CT540 fabZ, - CT532 vldD,yciA, - CT535 CT538 mip, - CT541 dnaQ, - CT536 lpxC, - CT533 fmt, - CT530 cutE,lnt, - CT534 aspS, - CT542 trxA, - CT539 spoU,yibK, - CT540 fabZ, - CT532 vldD,yciA, - CT535 CT538 mip, - CT541 dnaQ, - CT536 lpxC, - CT533 fmt, - CT530 cutE,lnt, - CT534 aspS, - CT542 CT537 lpxA, - CT531 CT537 lpxA, - CT531 trxA, - CT539
* Calculated from Protein Sequence

Gene ID: CT535

DNA Molecule Name:
1  

Genbank ID:


Gene Name:
vldD  yciA  

Definition:
acyl CoA thioester hydrolase

Gene Start:
603227

Gene Stop:
602748

Gene Length:
480

Molecular Weight*:
18478

pI*:
8.35

Net Charge*:
3.72

EC:
3.1.2.2  

Functional Class:
uncategorized  

Pathway: pathway table

Comment:


Blast Summary:  PSI-Blast Search
Hits in gapped BLAST to acyl coenzyme A thioester hydrolase sequences, e.g.
residues 23-159 are 40% similar to VDLD_HELPY (U94318). Psi-BLAST reveals
similarities with eukaryotic acyl-CoA hydrolases. No similarities to
T.pallidum or M.genitalium.

CT535 is orthologous to CPn0654: residues 9-160 are 78% similar to CPn0654.

COGS Summary:  COGS Search
BeTs to 4 clades of COG1607
COG name: Acyl-CoA hydrolase
Functional Class:  I
The phylogenetic pattern of COG1607 is --------eb-huj----in-
Number of proteins in this genome belonging to this COG is 1


Blocks Summary:  Blocks Search
None.

ProDom Summary:  Protein Domain Search
Residues 23-135 are 41% similar to a protein hydrolase domain as observed in
VDLD_HELPY.

Paralogs:  Local Blast Search
No evidence of paralogs in C.trachomatis.

Pfam Summary:  Pfam Search
Residues 33 to 111 (E-value = 7.6e-12) place CT535 in the 4HBT family which is described as Thioesterase superfamily (PF03061)

PDB Hit:
none

Gene Protein Sequence:
MRKDNKEDKRKKVSASCITDHIYKIFPNDLNTNNTIFGGLLMSLLDRLAL
VVAERHCESICVTAFVDAMRFYAPAYMGENLICCASVNRSWRTSLEVGVK
VWAENIYKQEHRHITSAYFTFVAVDKNNSPVEVPELIPESQEEIRRFREA
DQRRALRLKL

Gene Nucleotide Sequence:  Sequence Viewer
GTGAGGAAGGATAATAAAGAAGATAAAAGGAAAAAAGTTTCTGCCAGCTG
TATAACCGATCACATCTATAAAATATTCCCTAACGACTTAAATACGAATA
ACACGATCTTTGGTGGGCTATTGATGAGCCTGTTGGATCGATTGGCATTA
GTGGTTGCCGAACGGCATTGCGAAAGTATTTGTGTAACTGCTTTTGTAGA
TGCTATGCGTTTTTATGCTCCTGCTTATATGGGCGAAAATTTGATTTGCT
GCGCTTCCGTGAATCGGTCTTGGAGAACCTCTTTAGAAGTGGGCGTAAAA
GTCTGGGCAGAAAATATTTATAAGCAGGAACATCGCCATATCACCTCAGC
ATACTTTACTTTCGTTGCGGTAGACAAAAACAATTCCCCTGTGGAAGTTC
CAGAGTTAATCCCTGAAAGTCAGGAAGAAATACGCCGGTTTAGGGAAGCA
GACCAGAGAAGAGCTTTGCGCTTAAAACTT


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