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Chlamydia trachomatis Search Results

Record: 1 of 1  
MiniMap tRNA-Ser-1 IGR302 IGR295 IGR298 IGR299 IGR301 IGR300 IGR296 IGR297 CT357R bioY, - CT359 CT360 kgsA, - CT354 dapA, - CT361 CT355 lysC, - CT362 CT356 CT357 CT358 CT357R bioY, - CT359 CT360 kgsA, - CT354 dapA, - CT361 CT355 lysC, - CT362 CT356 CT357 CT358 CT357R bioY, - CT359 CT360 kgsA, - CT354 dapA, - CT361 CT355 lysC, - CT362 CT356 asd, - CT363 asd, - CT363 CT358 CT357
* Calculated from Protein Sequence

Gene ID: CT358

DNA Molecule Name:
1  

Genbank ID:


Gene Name:


Definition:
hypothetical protein (acidic)

Gene Start:
409838

Gene Stop:
410371

Gene Length:
534

Molecular Weight*:
18927

pI*:
4.62

Net Charge*:
-6.38

EC:
 

Functional Class:
hypothetical  

Pathway: pathway table

Comment:
No similarity to C. pneumoniae.

Blast Summary:  PSI-Blast Search
No significant hits in gapped BLAST. No similarities to C. pneumoniae, T. pallidum or M. genitalium.

COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
Residues 81-104 are weakly matched to a diphtheria toxin
signature sequence (block PR00769I).

ProDom Summary:  Protein Domain Search
None.

Paralogs:  Local Blast Search
No evidence of paralogs in C. trachomatis. However, residues 154-172
are 47% identical to a stretch of CT873, a hypothetical protein
(weak E value).

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

Structural Feature(s):
Feature Type  Start  Stop
transmembrane  
46  
72
transmembrane  
76  
102
non-globular  
108  
178

PDB Hit:
None.

Gene Protein Sequence:
MATPITVPPSSASSQSSPDVSPHLSSASAKNAIYNTKQGRPWPVIVSQIA
LLIMRISSIIVLGLGIAFLASNPMLGWSLLIAAITLAISSLLCAIAISVY
QTLTIRKLQSEVSSLERQSGVIFIEEGVEDALLSFESPFAGLEDDLVSPI
SPPLSPGDRSYIDHLVMQAEARSLEEHC

Gene Nucleotide Sequence:  Sequence Viewer
ATGGCTACACCGATTACTGTACCGCCTTCTTCAGCGTCATCACAATCTTC
TCCGGACGTTTCCCCACATTTATCTTCCGCTTCTGCTAAAAATGCAATAT
ACAACACTAAACAGGGAAGACCTTGGCCTGTCATAGTAAGCCAAATCGCT
CTTTTAATTATGAGAATTTCCTCTATTATTGTGCTTGGATTAGGAATAGC
GTTTCTGGCATCGAATCCTATGTTAGGATGGAGCCTGCTTATTGCAGCGA
TTACCCTAGCGATCTCTTCTCTATTATGTGCTATTGCAATCTCCGTCTAC
CAGACTCTAACTATCCGAAAATTACAAAGCGAAGTCTCCTCACTAGAACG
CCAGTCTGGCGTCATCTTTATAGAAGAAGGTGTCGAAGACGCCCTTCTAT
CCTTTGAGAGTCCATTCGCAGGATTAGAAGATGACCTCGTATCTCCTATC
TCTCCACCACTCTCTCCTGGGGATCGCTCTTATATAGATCATCTGGTGAT
GCAAGCCGAAGCTAGAAGCCTCGAAGAGCACTGC


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