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Treponema pallidum




Three different base composition analyses were performed on the coding regions in the Treponema pallidum genome: G+C content (%), genome signature, and codon bias. The genome signature and codon bias were determined according to methods established by Samuel Karlin (Trends Microbiol. 2001 Jul;9(7):335-43.). The codon bias of each gene was calculated against both the whole genome and the set of ribosomal proteins. Ribosomal proteins in microbial genomes are typically encoded by genes that have a codon usage distinct from the genome mean. Ribosomal proteins and genes with codon usage patterns similar to them have been linked to gene expression (Karlin S, Mrazek J. J Bacteriol. 2000 Sep;182(18):5238-50.). Genes that deviate from the genome, but not the set of ribosomal proteins are considered putative highly expressed, whereas genes that deviate from both the genome mean and the ribosomal proteins are considered putative alien genes. Each of these analyses is displayed below as well as a measure of deviation from the genome mean value. The table is ordered by gene ID numbers, which reflect genome position. Thus, gene clusters with deviant base composition can be identified. These clusters may have been the result of a lateral gene transfer event and are catalogued in the Genomic Island Table. Genes that are 3 or more standard deviations from the mean in any of the base composition metrics are catalogued the Deviant Gene Table.




Metric Mean Value Standard Deviation
 G+C Content (%) 52.70   4.37  
 Genome Signature 119   56  
 Codon Bias (Genome) 369   132  
 Codon Bias (Ribosomal) 405   135  


Standard deviations are indicated by a number of stars:
*       difference from mean is greater than 1.5  standard deviations
**      difference from mean is greater than 2    standard deviations
***     difference from mean is greater than 3    standard deviations
****    difference from mean is greater than 4    standard deviations
*****   difference from mean is greater than 5    standard deviations





 Gene       G+C        Genome      Codon Bias   Codon Bias     Database
  ID 	  Content(%)  Signature     (Genome)    (Ribosomal)    Definition
-------   -------    -----------   ----------   -----------    --------------------
TP0001     40.73 **     154           381           527        chromosomal replication initiator protein
TP0002     41.33 **     114           389           507        DNA polymerase III, subunit beta
TP0003     43.67 **      83           298           320        RecF protein
TP0004     47.13        147           466           441        hypothetical protein
TP0005      47.6         84           222           251        DNA gyrase subunit A (topoisomerase II)
TP0006     45.45 *      222 *         655 **        632 *      Tp75 protein
TP0007     50.93         73           303           328        hypothetical protein
TP0008     48.69        172           472           546        hypothetical protein
TP0009     51.65        112           277           422        Treponema pallidum repeat protein A (Msp) (authentic
                                                               frameshift - corrected)
TP0010     47.97        301 ***       831 ***       860 ***    hypothetical protein
TP0011     52.58         63           201           231        Treponema pallidum repeat protein B (Msp)
TP0012     48.28        331 ***       820 ***       783 **     hypothetical protein (basic)
TP0013     50.53        138           409           398        hypothetical protein
TP0014     49.01         95           377           350        hypothetical protein
TP0015     50.11         69           231           277        phenylalanyl-tRNA synthetase beta subunit
TP0016     50.29         80           272           252        ATP-dependent protease LA (lon)
TP0017     48.25        101           303           300        conserved hypothetical protein
TP0018     45.18 *       68           208           243        possible transcription elongation factor
TP0019     45.47 *      122           442           474        transcription elongation factor
TP0020     49.41         64           252           214        76K protein (basic)
TP0021      42.8 **     166           553           544        hypothetical protein
TP0022     50.05         74           296           333        hypothetical protein
TP0023     47.48        160           341           349        sodium- and chloride- dependent transporter
TP0024      45.2 *      109           332           396        conserved hypothetical protein
TP0025     50.44         62           239           391        conserved hypothetical protein
TP0026     52.25        178           255           345        flagellar motor switch protein
TP0027     51.43        115           241           282        possible hemolysin
TP0028     49.08        112           344           343        possible hemolysin
TP0029     50.12         80           366           341        enol-pyruvyltransferase
TP0030     50.18         92           286           231        heat shock protein
TP0031     56.52        232 **        490           472        hypothetical protein (basic)
TP0032     51.13         97           378           515        conserved hypothetical protein (basic)
TP0033     43.68 **     129           405           444        probable ABC transporter component; predicted MSD
                                                               element
TP0034     48.73         74           263           350        ABC transporter solute binding protein
TP0035      47.9         65           301           328        ABC transporter, ATP-binding protein (NBD element)
TP0036     52.38        163           268           339        ABC transporter, permease protein; predicted MSD
                                                               element
TP0037     51.66         60           235           329        D-lactate dehydrogenase
TP0038     54.29        134           435           504        potential regulatory molecule/  pfoS/R-like protein
TP0039     49.36        253 **        691 **        680 **     hypothetical protein
TP0040     54.33         70           262           285        methyl-accepting chemotaxis protein
TP0041      62.5 **     265 **        702 **        726 **     hypothetical protein (basic)
TP0042     55.59        141           336           282        hypothetical protein
TP0043     51.64         47           157           212        soluble lytic murein transglycosylase
TP0044     49.37         92           220           288        possible glucose inhibited division A protein
TP0045     43.48 **      99           326           415        adenosine aminohydrolase (deaminase)
TP0046     49.07        105           394           492        conserved hypothetical protein
TP0047     46.82        155           441           532        conserved hypothetical protein (basic)
TP0048     52.21        148           332           384        conserved hypothetical protein (basic)
TP0049      53.9        110           260           402        conserved hypothetical protein (basic)
TP0050     53.47        116           401           448        phosphoribosyltransferase
TP0051     49.76        109           297           305        peptide chain release factor 1
TP0052     55.27         94           260           330        protoporphyrinogen oxidase
TP0053      45.2 *       73           316           402        ribonucleoside-diphosphate reductase beta chain
TP0054     53.19         54           257           300        conserved hypothetical protein (basic)
TP0055     58.12        202           555           633 *      hypothetical protein
TP0056     54.08        107           271           246        oxaloacetate decarboxylase alpha subunit
TP0057     52.52        104           227           215        oxaloacetate decarboxylase beta subunit
TP0058     53.04         81           346           467        replicative DNA helicase
TP0059     54.67        288 ***       764 **        692 **     hypothetical protein
TP0060     48.08        126           479           491        50S ribosomal protein L9
TP0061     51.52        186           461           502        30S ribosomal protein S18
TP0062     53.98        164           452           465        single-strand DNA binding protein
TP0063     53.76        143           465           511        30S ribosomal protein S6
TP0064     49.74        115           344           289        Treponema-specific protein, uncharacterized
TP0065     49.91        107           397           367        possible N6-adenine specific methylase
TP0066     52.56        112           468           472        hypothetical protein
TP0067     50.38         71           235           266        conserved hypothetical protein (containing TPR
                                                               domains)
TP0068     53.33         81           236           319        conserved hypothetical protein
TP0069     52.65         85           359           468        hypothetical protein (basic)
TP0070     53.13         79           419           479        hypothetical protein
TP0071     49.89         46           280           456        ATP-dependent Clp protease subunit B
TP0072     48.89        157           498           501        conserved hypothetical protein
TP0073      52.5         61           359           508        hypothetical protein
TP0074     55.22         89           205           270        probable maltose sugar ABC transporter, periplasmic
                                                               binding protein
TP0075     49.44         84           371           378        probable maltose sugar ABC transporter, permease
                                                               protein
TP0076      48.6        123           421           436        probable maltose sugar ABC transporter, permease
                                                               protein
TP0077     50.31         77           228           274        probable epimerase/dehydratase (capsular
                                                               polysaccharide biosynthesis protein)
TP0078     50.08        106           279           308        spore coat polysaccharide biosynthesis protein
TP0079     50.14         83           225           261        xanthine dehydrogenase homolog/ xanthine oxidase
                                                               homolog
TP0080     43.23 **     109           489           516        4-hydroxybenzoyl-CoA reductase/ quinoline 2-
                                                               oxidoreductase/ possible XDH-related protein
TP0081     46.69         66           326           327        conserved hypothetical protein/ possible XDH-related
                                                               protein
TP0082     52.75         80           326           488        activator for sigma 54 promoters
TP0083      54.3         89           257           281        conserved hypothetical protein (basic)
TP0084     53.68        159           648 **        602        hypothetical protein (acidic)
TP0085        50        177           477           474        PTS system nitrogen regulatory IIA component/ PTS
                                                               system nitrogen regulatory BC component
TP0086     53.72         90           323           257        conserved hypothetical protein
TP0087     57.73        128           452           528        conserved hypothetical protein
TP0088     48.69         80           295           342        conserved hypothetical protein
TP0089     45.42 *       34           271           405        conserved hypothetical protein/ possible cyclic
                                                               nucleotide-binding protein
TP0090     57.82         81           225           351        UDP-N-acetylpyruvoylglucosamine reductase
TP0091     54.62         90           258           291        cysteinyl-tRNA synthetase
TP0092     54.32        149           453           422        RNA polymerase sigma-24 factor (sigma E)
TP0093      55.5        180           375           358        hypothetical protein (basic)
TP0094     51.59         68           400           489        phosphotransacetylase
TP0095     56.69         78           184           239        conserved hypothetical protein (containing TPR
                                                               domains)
TP0096     53.61        201           457           489        conserved hypothetical protein (acidic)/ possible
                                                               DnaK suppressor
TP0097     55.09        144           569 *         630 *      translation initiation factor IF-1
TP0098     60.34 *      133           407           466        heat-shock protein DnaJ
TP0099     55.78        105           365           372        uridylate kinase
TP0100        55        126           397           354        thio:disulfide interchange protein CycY precursor
                                                               (Cytochrome C biogenesis protein CycY)
TP0101     55.43        132           348           354        cytochrome c biogenesis protein
TP0102      45.1 *       77           342           478        DNA helicase II
TP0103     52.83        145           297           324        ATP-dependent DNA helicase
TP0104     48.45         51           342           341        5'-nucleotidase
TP0105     44.77 *       70           339           366        DNA polymerase I
TP0106     49.28        118           248           367        transporter (possible carnitine, choline, or glycine
                                                               betaine transporter)
TP0107     47.05         75           288           398        lic protein (phase variation protein)/
                                                               liposaccharide biosynthesis protein
TP0108     51.12         79           235           330        pyrophosphate--fructose 6-phosphate 1-
                                                               phosphotransferase, alpha subunit
TP0109     55.37        124           314           441        rRNA methylase
TP0110     49.65         86           208           224        hypothetical protein
TP0111        48         49           285           355        RNA polymerase sigma-54 factor
TP0112     46.96         80           254           395        cysteine aminopeptidase C
TP0113     46.65        137           293           283        Lambda cII stability-governing protein
TP0114     49.65         94           248           304        Lambda cII stability-governing protein
TP0115     54.52         96           322           458        phosphomethylpyrimidine kinase
TP0116     45.36 *       83           348           400        excinuclease ABC, subunit B
TP0117     56.35        117           369           498        Treponema pallidum repeat protein C (Msp)
TP0118     55.66        121           245           313        hypothetical protein
TP0119     55.25        142           429           443        amino acid ABC transporter, permease protein
TP0120     52.17        106           340           421        probable glutamine amino acid ABC transporter, ATP-
                                                               binding protein
TP0121     57.28         91           308           273        conserved hypothetical protein
TP0122     53.99         96           295           449        phosphoenolpyruvate carboxykinase
TP0123     48.95         63           183           255        hypothetical protein containing TPR domains
TP0124     52.63        104           290           293        possible GTP-binding protein
TP0125     56.82        108           356           331        exodeoxyribonuclease
TP0126     59.11        141           426           480        hypothetical protein
TP0127     56.04        170           360           377        hypothetical protein (member of large T.p. group)
TP0128      62.9 **     172           492           511        hypothetical protein
TP0129     59.92 *       82           422           424        hypothetical protein
TP0130     59.23        130           532           665 *      hypothetical protein (basic)
TP0131     56.35        117           369           498        Treponema pallidum repeat protein D (Msp)
TP0132     50.72        247 **        549           601        hypothetical protein (basic)
TP0133     56.83         66           360           480        hypothetical protein (member of a group in
                                                               T.pallidum)
TP0134     57.45         73           404           491        hypothetical protein (member of a group of T.p.
                                                               hypotheticals)
TP0135     59.21        110           449           596        hypothetical protein (basic)
TP0136     61.08 *      139           458           513        hypothetical protein
TP0137     54.07        244 **        869 ***       911 ***    hypothetical protein
TP0138     49.12        104           324           358        hypothetical protein (basic)
TP0139     48.12         91           358           418        conserved hypothetical protein
TP0140     47.19         85           212           309        Probable sodium translocating ATPase subunit J
TP0141     56.12        141           292           332        methylated-DNA-protein-cysteine S-methyltransferase
TP0142     51.82         88           431           518        ABC transporter; possible ferric transport ATP-
                                                               binding protein
TP0143     53.29        106           273           424        probable ABC transporter protein, possibly for iron,
                                                               molybdenum, amino acids
TP0144     57.81         96           340           468        putative thiamine ABC transporter, thiamine-binding
                                                               periplasmic protein
TP0145     53.86         55           271           241        long-chain-fatty-acid--CoA ligase
TP0146     49.63         86           246           308        chromate resistance protein A (authentic frameshift
                                                               - corrected)
TP0147     44.91 *       61           313           448        alpha-amylase 1
TP0148     51.39        119           396           490        hypothetical protein
TP0149     50.25         80           376           487        hypothetical protein
TP0150     49.46         90           396           527        hypothetical protein
TP0151     54.67        158           298           441        hypothetical protein
TP0152     57.46         59           309           431        hypothetical protein/ possible nitrogen fixation-
                                                               related protein
TP0153     55.01        140           386           405        conserved hypothetical protein
TP0154     58.65        100           288           283        conserved hypothetical protein (basic)
TP0155     52.38         95           259           276        conserved hypothetical protein/ possible lipoprotein
                                                               precursor Nlp
TP0156     51.24        124           420           515        conserved hypothetical protein
TP0157     50.22         65           367           514        conserved hypothetical protein/ possible glycerol-3-
                                                               phosphate acyltransferase
TP0158     48.83        186           399           526        conserved hypothetical protein
TP0159     51.66         62           277           419        hypothetical protein
TP0160     56.08         60           290           424        prolyl-tRNA synthetase
TP0161     56.67        221 *         854 ***       848 ***    hypothetical protein
TP0162     58.67         73           340           468        Holliday junction DNA helicase, subunit B
TP0163     53.57         59           306           289        ABC transporter, periplasmic binding protein (SBP
                                                               component)
TP0164     53.51         95           257           271        ABC transporter, ATP-binding protein
TP0165     51.68        125           289           293        ABC transporter, permease protein
TP0166     52.36         94           340           298        ABC transporter, permease protein
TP0167     50.98         68           478           422        cation-activated repressor protein (iron dependent
                                                               repressor)
TP0168     51.66         86           282           265        phosphoglycerate mutase (phosphoglyceromutase)
TP0169     56.25        400 *****     896 ***       840 ***    hypothetical protein (basic)
TP0170     55.02        100           350           327        pfs protein (purine nucleoside phosphorylase)
TP0171     52.82         96           442           369        lipoprotein, 15 kDa
TP0172     55.05        129           447           514        hypothetical protein
TP0173     51.03         46           320           366        hypothetical protein (basic)
TP0174     44.29 *      116           357           470        hypothetical protein (basic)
TP0175     43.81 **     116           426           526        hypothetical protein
TP0176     45.83 *      148           541           622 *      hypothetical protein (basic)
TP0177     48.78         95           294           438        hypothetical protein (basic)
TP0178      57.9        123           401           458        hypothetical protein
TP0179     60.93 *      127           305           335        hypothetical protein (acidic)
TP0180     60.26 *      231 **        660 **        714 **     hypothetical protein
TP0181     56.24        140           342           355        hypothetical protein
TP0182     60.36 *      105           290           314        conserved hypothetical protein
TP0183     56.77        125           310           401        hypothetical protein (basic)
TP0184     56.97        149           519           492        small protein B homolog
TP0185     53.48         67           286           342        signal peptidase I
TP0186     54.54        106           297           288        oxygen-independent coproporphyrinogen III oxidase
TP0187     51.92         49           283           215        translation elongation factor TU
TP0188     52.94        150           505           437        30S ribosomal protein S10
TP0189     54.17        125           335           312        50S ribosomal protein L3
TP0190     49.38         70           426           335        50S ribosomal protein L4
TP0191     52.48        148           568 *         455        50S ribosomal protein L23
TP0192     56.41        113           391           281        50S ribosomal protein L2
TP0193     47.37        213 *         499           463        30S ribosomal protein S19
TP0194     52.96        167           493           422        50S ribosomal protein L22
TP0195     51.42        101           443           352        30S ribosomal protein S3
TP0196        53        176           517           455        50S ribosomal protein L16
TP0197     45.37 *      194           659 **        581        possible 50S ribosomal protein L29
TP0198     53.57        148           539           418        30S ribosomal protein S17
TP0199     48.63        180           445           348        50S ribosomal protein L14
TP0200     50.81        144           475           414        50S ribosomal protein L24
TP0201     46.75         91           425           359        50S ribosomal protein L5
TP0202      54.1        139           675 **        677 **     30S ribosomal protein S14
TP0203     49.24        165           464           410        30S ribosomal protein S8
TP0204     51.96        183           452           358        50S ribosomal protein L6
TP0205        50        129           502           453        50S ribosomal protein L18
TP0206     51.94         91           427           340        30S ribosomal protein S5
TP0206.    57.38        173           755 **        637 *      50S ribosomal protein L30
TP0207     56.86        137           500           381        50S ribosomal protein L15
TP0208     49.11         61           273           242        preprotein translocase subunit
TP0209     41.44 **     194           801 ***       685 **     50S ribosomal protein L36
TP0210     47.38         83           512           456        30S ribosomal protein S13
TP0211     52.38        118           368           436        30S ribosomal protein S11
TP0212     49.38        108           293           256        DNA-directed RNA polymerase alpha subunit
TP0213     52.44         96           353           330        50S ribosomal protein L17
TP0214     57.95        223 *         619 *         510        hypothetical protein (basic)
TP0215     57.73        165           370           286        grpE protein
TP0216      51.6         96           194           229        heat shock protein 70
TP0217     54.05        100           304           249        heat shock protein (authentic frameshift -
                                                               corrected)
TP0218     46.42         80           241           271        possible sigma factor SigB regulation protein
TP0219     41.68 **      78           293           300        possible sigma factor SigB regulation protein
TP0220     49.07        197           474           457        anti-sigma F factor antagonist
TP0221     56.03         67           382           333        carboxypeptidase
TP0222      52.7        124           521           523        hypothetical protein (basic)
TP0223     53.33         75           319           268        aspartate aminotransferase
TP0224     49.02        164           788 ***       750 **     hypothetical protein (basic)
TP0225     51.63        107           321           264        leucine-rich repeat protein
TP0226     49.12        114           319           445        ABC transporter; probable MSD element
TP0227     52.94         71           346           486        ABC transporter, cobalt ATP-binding protein
TP0228     55.72         99           378           452        probable biotin synthase
TP0229     55.72        101           234           276        DNA polymerase, bacteriophage-type
TP0230     56.32         94           232           240        primosomal protein N
TP0231     55.09        194           358           363        conserved hypothetical protein (basic)
TP0232     56.14        272 **        733 **        687 **     hypothetical protein
TP0233      45.3 *      166           452           432        anti-sigma F factor antagonist
TP0234        50        149           707 **        627 *      50S ribosomal protein L33
TP0235     54.24        193           663 **        616 *      hypothetical protein/ possible preprotein
                                                               translocase subunit
TP0236     52.97        137           467           340        transcription antitermination protein
TP0237     54.34        110           454           346        50S ribosomal protein L11
TP0238     53.83        158           454           350        50S ribosomal protein L1
TP0239     54.81         94           440           386        50S ribosomal protein L10
TP0240      52.2        159           451           426        50S ribosomal protein L7/L12
TP0241     49.97         90           186           193        DNA-directed RNA polymerase beta subunit
TP0242     50.61         48           169           158        DNA-directed RNA polymerase beta' subunit
TP0243     54.57        134           514           437        30S ribosomal protein S12
TP0244     55.13         91           440           401        30S ribosomal protein S7
TP0245     52.01         41           152           223        hypothetical protein
TP0246     46.51         59           231           270        hypothetical protein (basic)
TP0247     48.27         75           366           354        N-acetylmuramoyl-L-alanine amidase
TP0248     57.14        176           506           475        hypothetical protein
TP0249     54.48        106           412           291        flagellar filament outer layer protein
TP0250     55.11        326 ***       463           525        hypothetical protein (basic)
TP0250.    56.14        212 *         685 **        573        30S ribosomal protein S20
TP0251     54.92        182           533           464        DNA-binding protein II (HB) (HU)
TP0252      54.4         53           275           223        apolipoprotein N-acyltransferase
TP0253     52.07        114           500           393        conserved hypothetical protein (basic)
TP0254        49        103           197           235        transcription termination factor Rho
TP0255     49.25        125           619 *         601        50S ribosomal protein L31
TP0256     47.99         92           294           253        phosphatidylglycerophosphate synthase (CDP-
                                                               diacylglycerol--glycerol-3-phosphate 3-
                                                               phosphatidyltransferase)
TP0257     48.31         53           230           300        protein D, glycerophosphodiester phosphodiesterase
TP0258     52.68        123           307           451        conserved hypothetical protein
TP0259     53.86        134           358           304        conserved hypothetical protein (acidic)
TP0260     57.07        103           399           541        hypothetical protein
TP0261     54.56         92           377           284        hypothetical protein (acidic)
TP0262     51.93         99           367           311        catabolite gene activator (cAMP receptor protein)
TP0263     58.02         66           305           266        conserved hypothetical protein
TP0264     56.88        115           315           372        deoxyribose-phosphate aldolase
TP0265     55.02        175           501           675 *      amino acid ABC transporter permease protein
TP0266     53.66        312 ***       756 **        727 **     hypothetical protein (basic)
TP0267     51.52        184           553           472        conserved hypothetical protein
TP0268     58.37        182           385           348        conserved hypothetical protein (containing TPR
                                                               domains)
TP0269     50.41         71           284           323        conserved hypothetical protein (basic)
TP0270     54.88        100           218           266        polynucleotide adenylyltransferase
TP0271     53.29         86           285           347        chromosome partitioning protein
TP0272     48.35         77           364           404        chromosome partitioning protein
TP0273     53.74        188           296           386        hypothetical protein
TP0274     56.22        207 *         364           457        deoxycytidylate deaminase (dCMP deaminase)
TP0275        51        115           373           488        UDP-N-acetyl-D-mannosamine transferase
TP0276     56.92        132           323           435        conserved hypothetical protein (basic)
TP0277     50.52         89           370           531        carboxyl-terminal protease
TP0278      61.9 **     203 *         638 **        640 *      hypothetical protein
TP0279     55.29         79           271           149        30S ribosomal protein S1/ cytidylate kinase
TP0280     59.52 *      250 **        641 **        583        hypothetical protein
TP0281     58.73        375 ****      684 **        669 *      hypothetical protein
TP0282     59.55 *      160           334           261        hypothetical protein (basic)
TP0283     51.78        131           427           364        lipopolysaccharide core biosynthesis protein
TP0284     54.64        149           349           311        hypothetical protein
TP0285     48.93        118           334           318        hypothetical protein
TP0286     48.21        107           478           492        hypothetical protein (acidic)
TP0287     45.89 *      121           379           351        conserved hypothetical protein
TP0288     52.38         99           304           303        spore coat polysaccharide biosynthesis protein F
TP0289     48.13         60           286           285        hypothetical protein
TP0290     46.57        129           323           342        conserved hypothetical protein
TP0291     50.74        119           356           356        conserved hypothetical protein (basic)
TP0292     49.96        102           282           269        outer membrane protein (ompA-homolog)
TP0293     55.75        212 *         593 *         492        hypothetical protein (basic)
TP0294     47.35         97           226           275        phosphoribosyl pyrophosphate synthetase
TP0295     52.58         72           316           280        xylulokinase
TP0296     52.13        155           391           444        conserved hypothetical protein (basic)
TP0297     53.58        132           278           288        conserved hypothetical protein (basic)
TP0298     54.91         57           266           295        Exported protein TpN38(b); possible ABC solute
                                                               binding protein
TP0299     64.86 **     174           547           595        hypothetical protein (basic)
TP0300     53.36        111           348           403        ABC transporter; ribose/galactose NBD-NBD fusion
                                                               protein
TP0301     50.84        102           278           318        ABC transporter, predicted ribose/galactose permease
                                                               (MSD) protein
TP0302     55.48        203 *         339           425        ABC transporter probable MSD element.
TP0303     57.61         69           411           590        DNA mismatch repair protein
TP0304     56.34         67           317           428        hypothetical protein
TP0305     58.29         39           264           237        CTP synthase
TP0306     53.76        136           497           435        30S ribosomal protein S4
TP0307     55.46        109           291           286        conserved hypothetical protein
TP0308      56.7        110           281           276        amino acid ABC transporter, periplasmic binding
                                                               protein/ possible FliY (sulfate starvation induced
                                                               protein 7)
TP0309     57.48        118           287           311        amino acid ABC transporter, periplasmic binding
                                                               protein/ FliY (sulfate starvation induced protein 7)
TP0310     58.79        158           453           416        hypothetical protein
TP0311     56.03        230 *         681 **        844 ***    hypothetical protein
TP0312     60.83 *      137           380           379        conserved hypothetical protein (basic)
TP0313     56.78        132           251           301        Treponema pallidum repeat protein E (Msp)
TP0314     59.72 *      253 **        756 **        761 **     hypothetical protein (basic)
TP0315     61.09 *      115           439           439        hypothetical protein
TP0316     57.97        161           351           403        Treponema pallidum repeat protein F (authentic
                                                               frameshift - corrected)
TP0317     56.35        135           286           356        Treponema pallidum repeat protein G (Msp)
TP0318     62.15 **     409 *****     775 ***       766 **     hypothetical protein
TP0319     54.49         97           291           263        membrane lipoprotein; possible ABC transporter
                                                               solute binding protein
TP0320     58.82        143           738 **        690 **     hypothetical protein (basic)
TP0321     56.91         95           231           232        ABC transporter, ribose/galactose ATP-binding
                                                               protein, NBD-NBD fusion
TP0322     55.42         92           244           266        ribose/galactose ABC transporter, permease (MSD)
                                                               protein
TP0323     53.27        159           308           283        ribose/galactose ABC transporter, permease protein
TP0324     55.88         81           251           313        hypothetical protein
TP0325     54.55         84           297           266        conserved hypothetical protein
TP0326     52.21         91           278           298        outer membrane protein
TP0327     51.16        189           482           585        outer membrane protein
TP0328     54.15         48           252           418        DNA mismatch repair protein
TP0329     54.41         41           148           252        serine hydroxymethyltransferase
TP0330     45.93 *       74           250           378        probable cell division protein
TP0331     55.26        114           284           402        phosphogluconate dehydrogenase
TP0332     52.03        253 **        629 *         609 *      hypothetical protein
TP0333     50.29         54           305           399        conserved hypothetical protein
TP0334     55.56         52           255           339        conserved hypothetical protein
TP0335     57.96        149           458           576        hypothetical protein
TP0336        52        155           226           240        probable comE protein
TP0337     48.07        161           396           398        dimethyladenosine transferase
TP0338     49.38        139           389           399        hypothetical protein
TP0339     48.44        103           343           388        possible ftsH suppressor protein SfhB
TP0340     47.01        128           310           459        folylpolyglutamate synthetase
TP0341      49.9         68           260           253        UDP-N-acetylmuramate--alanine ligase
TP0342     48.39         89           345           349        cytidylate kinase
TP0343     49.58         48           257           282        A/G-specific adenine glycosylase
TP0344     49.68         58           327           493        transcription-repair coupling factor
TP0345     50.78        136           434           403        phospho-N-acetylmuramoyl-pentapeptide-transferase
TP0346     54.94        100           403           373        hypothetical protein
TP0347     57.49         78           415           405        hypothetical protein
TP0348     59.99 *       93           355           424        hypothetical protein
TP0349     57.77        131           387           431        peptidyl-prolyl cis-trans isomerase, FKBP-type
TP0350     55.76         85           243           259        gamma-glutamyl phosphate reductase (glutamate-5-
                                                               semialdehyde dehydrogenase)
TP0351     55.97         58           339           322        glutamate 5-kinase
TP0352     52.94        134           474           527        hypothetical protein
TP0353      60.4 *      174           632 *         771 **     ribonuclease H
TP0354     47.28         60           306           341        thymidylate kinase
TP0355     47.77         96           569 *         679 **     hypothetical protein
TP0356     47.94        193           507           412        RNA-binding protein
TP0357     58.94        149           404           385        biotin--acetyl-CoA-carboxylase ligase
TP0358     51.93         54           283           445        conserved hypothetical protein
TP0359     52.76        133           426           524        hypothetical protein
TP0360     55.17        229 *         579 *         538        hypothetical protein
TP0361     57.68         90           478           630 *      1-acyl-sn-glycerol-3-phosphate acyltransferase
TP0362     60.26 *      225 *         563           608 *      50S ribosomal protein L28
TP0363     54.27         85           230           163        chemotaxis histidine kinase
TP0364     52.23        128           265           238        purine-binding chemotaxis protein/ chemotaxis
                                                               protein methyltransferase
TP0365      52.6        105           415           350        chemotaxis protein
TP0366     48.38        133           455           371        chemotaxis response regulator
TP0367     52.46        118           173           278        chromosome segregation SMC protein homolog
TP0368     59.46 *      133           528           488        hypothetical protein
TP0369     59.11        150           259           277        hypothetical protein
TP0370     50.72        241 **        538           659 *      hypothetical protein (acidic)
TP0371     58.26         85           383           323        conserved hypothetical protein/ possible homoserine
                                                               kinase
TP0372     55.95        128           422           371        general stress protein/ possible 50S ribosomal
                                                               protein L25
TP0373     57.02         90           255           264        conserved hypothetical protein
TP0374     54.32         50           208           226        hypothetical protein
TP0375     50.24        172           640 **        722 **     hypothetical protein
TP0376     53.38        108           285           363        hypothetical protein
TP0377      56.1        254 **        896 ***       926 ***    hypothetical protein
TP0378     53.17        138           454           515        hypothetical protein
TP0379     51.78         61           149           299        preprotein translocase subunit
TP0380      54.9         48           255           404        probable DNA repair helicase
TP0381      54.2        117           340           407        hypothetical protein
TP0382     59.17        217 *         788 ***       776 **     hypothetical protein
TP0383     58.39        165           455           485        conserved hypothetical protein
TP0384     59.63 *      108           287           260        conserved hypothetical protein
TP0385     55.11        120           467           409        hypothetical protein
TP0386     52.07         49           243           239        UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-
                                                               diaminopimelate--D-alanyl-D-alanine ligase
TP0387     42.36 **      94           337           333        cell division protein
TP0388     45.88 *       56           355           344        cell division protein
TP0389     49.52        101           264           301        cell division protein
TP0390     50.32         51           275           312        cell division protein
TP0391     50.44        109           329           359        integrase/recombinase
TP0392     50.68        106           275           266        conserved hypothetical protein (containing TPR
                                                               domains)
TP0393     49.78         80           349           400        smf protein
TP0394     47.88         60           232           271        DNA topoisomerase I
TP0395     51.85        112           433           409        integrase/recombinase
TP0396     48.53        131           406           326        flagellar basal-body rod protein
TP0397      50.9        102           452           418        flagellar basal-body rod protein
TP0398     48.39        148           413           414        flagellar hook-basal body complex protein
TP0399     50.15         93           180           217        flagellar basal-body M ring protein
TP0400     45.64 *      121           287           359        flagellar motor switch protein
TP0401     51.13        152           318           302        flagellar assembly protein
TP0402     55.41         79           293           299        flagellum-specific ATP synthase
TP0403        54        227 *         393           444        hypothetical protein
TP0404     54.99        117           424           540        hypothetical protein
TP0405     48.32        155           426           529        conserved hypothetical protein
TP0406     53.23        190           332           348        glutamate racemase
TP0407     56.33        102           328           356        possible halo acid dehalogenase
TP0408     50.34        115           225           216        conserved hypothetical protein
TP0409     53.01        208 *         563           602        hypothetical protein
TP0410     53.63         84           224           203        protein-export membrane protein
TP0411     54.29        124           282           249        protein-export membrane protein
TP0412     47.52        150           571 *         669 *      conserved hypothetical protein
TP0413     54.59         63           280           406        phosphoglucomutase
TP0414     56.25        125           429           380        D-alanine glycine permease
TP0415     59.51 *      168           519           534        hypothetical protein
TP0416     55.09         60           257           378        signal recognition particle protein
TP0417     57.46         77           334           481        apolipoprotein N-acyltransferase
TP0418     54.58         76           308           250        galactokinase
TP0419     58.65        122           443           442        survival protein
TP0420     59.11        202           566           504        hypothetical protein
TP0421     55.44         68           246           226        conserved hypothetical protein
TP0422     57.28         72           290           243        hypothetical protein (basic)
TP0423     55.72        102           380           403        conserved hypothetical protein (basic)
TP0424     56.75        236 **        464           391        possible V-type ATPase subunit E
TP0425     60.47 *      207 *         454           426        hypothetical protein
TP0426     54.05         65           230           201        V-type ATPase subunit A
TP0427     50.93        115           285           232        V-type ATPase subunit B
TP0428     50.65        134           365           404        V-type ATPase subunit D
TP0429     53.27         72           188           209        V-type ATPase subunit I
TP0430     54.29        227 *         447           373        V-type ATPase subunit K
TP0431     57.51         73           327           349        conserved hypothetical protein
TP0432     56.83        151           313           335        hypothetical protein
TP0433     58.67        134           414           426        hypothetical protein
TP0434     59.91 *      200           480           450        hypothetical protein (acidic)
TP0435     55.98        171           389           411        lipoprotein, 17 kDa
TP0436     59.26 *      109           355           366        conserved hypothetical protein
TP0437     54.17        154           371           428        hypothetical protein (basic)
TP0438     58.49         95           302           312        conserved hypothetical protein (basic)
TP0439     54.51        143           572 *         533        purine-binding chemotaxis protein
TP0440      56.4        104           330           376        polysaccharide biosynthesis protein
TP0441     53.88         77           264           311        conserved hypothetical protein
TP0442     55.15        101           261           283        DNA repair protein
TP0443     48.24        100           334           325        conserved hypothetical protein
TP0444     55.82         82           292           318        conserved hypothetical protein/ possible lipoprotein
                                                               precursor
TP0445     59.65 *      101           355           343        4-methyl-5(b-hydroxyethyl)-thiazole monophosphate
                                                               biosynthesis enzyme
TP0446     52.06         71           287           325        GCPE-related protein (protein E)
TP0447     50.71         89           255           289        hypothetical protein
TP0448     44.81 *      100           310           328        possible uracil phosphoribosyltransferase
TP0449     44.22 *      176           464           458        hypothetical protein
TP0450     49.49         77           259           277        translation elongation factor G
TP0451     51.67        246 **        631 *         714 **     hypothetical protein (basic)
TP0452     48.85         68           246           243        isoleucyl-tRNA synthetase
TP0453     46.46        113           290           306        Treponema-specific protein, uncharacterized
TP0454      55.9        124           381           472        hypothetical protein
TP0455     52.79        122           263           340        conserved hypothetical protein (basic)
TP0456     59.36 *      129           360           529        hypothetical protein
TP0457     58.12         96           265           284        conserved hypothetical protein (basic)
TP0458     58.85        146           334           339        conserved hypothetical protein
TP0459     59.77 *      130           317           335        conserved hypothetical protein (probable 16S
                                                               pseudouridine 516 synthase)
TP0460     59.15         65           354           326        hypothetical protein containing TPR domains
TP0461     57.98        162           505           518        hypothetical protein (acidic)
TP0462     56.19        160           405           522        hypothetical protein
TP0463     56.97        152           457           510        hypothetical protein (acidic)
TP0464     61.87 **     139           447           571        conserved hypothetical protein (basic)
TP0465     55.52        122           364           462        hypothetical protein
TP0466     45.84 *       76           281           356        hypothetical protein
TP0467     53.25        184           568 *         628 *      hypothetical protein (basic)
TP0468     57.01        146           389           463        conserved hypothetical protein (containing TPR
                                                               domains)
TP0469     57.77        101           228           334        conserved hypothetical protein
TP0470     62.69 **     210 *         465           480        conserved hypothetical protein (basic)
TP0471     53.66        100           246           210        conserved hypothetical protein
TP0472      50.8         57           330           498        excinuclease ABC subunit C
TP0473     48.91        122           319           360        hypothetical protein
TP0474     52.38        122           376           367        conserved hypothetical protein (acidic)
TP0475     53.77         71           250           385        glucose-6-phosphate isomerase
TP0476     52.46         68           335           491        acetate kinase
TP0477     56.43         41           335           391        glucose-6-phosphate dehydrogenase isozyme
TP0478      55.6         69           359           468        glucose-6-phosphate 1-dehydrogenase
TP0479      56.4        157           424           427        hypothetical protein (basic)
TP0480     56.79        136           442           506        hypothetical protein(basic)
TP0481     57.02         91           252           314        hypothetical protein(basic)
TP0482      60.4 *      139           401           431        hypothetical protein(basic)
TP0483     52.64         90           314           427        hypothetical protein(basic)
TP0484     55.09         75           220           374        hypothetical protein(basic)
TP0485     52.44         68           334           474        possible adenylate cyclase
TP0486      60.4 *       91           250           347        B. burgdorferi antigen-like protein
TP0487     59.81 *       72           305           445        hypothetical protein(basic)
TP0488     54.79         54           219           209        methyl-accepting chemotaxis protein/ protease
TP0489     48.55        111           336           340        metallo-beta-lactamase superfamily protein
TP0490     55.38        212 *         646 **        575        hypothetical protein (acidic)
TP0491     52.23         53           250           301        conserved hypothetical protein (basic)
TP0492     51.07         78           245           224        DNA primase
TP0493     49.05         97           200           213        RNA polymerase sigma-70 factor
TP0494     52.14        114           283           294        conserved hypothetical protein (acidic)
TP0495      55.1        256 **        697 **        788 **     hypothetical protein(basic)
TP0496     53.39        109           298           236        conserved hypothetical protein (basic)
TP0497     50.87        110           282           283        rod shape-determining protein
TP0498      48.2        164           364           417        rod shape-determining protein
TP0499     43.25 **     174           431           467        rod shape-determining protein
TP0500     48.45        102           231           311        penicillin-binding protein
TP0501     46.88         93           242           237        rod shape-determining protein
TP0502     50.67        113           353           332        ankyrin repeat protein
TP0503     54.01        108           364           391        hypothetical protein(basic)
TP0504     60.87 *      263 **        650 **        655 *      hypothetical protein(basic)
TP0505     53.68         65           283           399        hexokinase
TP0506      54.3        107           283           223        trigger factor
TP0507      53.2        139           381           311        ATP-dependent Clp protease proteolytic component
TP0508     48.59         83           297           274        ATP-dependent Clp protease subunit X
TP0509     51.42         72           341           264        alkyl hydroperoxide reductase
TP0510     52.29         62           218           278        GTP-binding membrane protein
TP0511     49.84        125           321           350        possible transcription factor
TP0512     57.14         89           252           298        conserved hypothetical protein
TP0513     51.07         49           260           297        TRK system potassium uptake protein
TP0514     47.33         41           272           326        excinuclease ABC, subunit A
TP0515     42.15 **      71           330           388        conserved hypothetical protein
TP0516     41.95 **      43           331           397        virulence factor
TP0517     46.94        126           418           489        Holliday junction nuclease, subunit C
TP0518     49.28        160           350           421        conserved hypothetical protein
TP0519     43.01 **      77           385           507        regulatory protein
TP0520     40.81 **      81           385           477        sensory transduction histidine kinase (authentic
                                                               frameshift - corrected)
TP0521     49.57         97           302           409        possible DNA polymerase III gamma and tau subunits
TP0522      45.7 *      102           341           401        hypothetical protein(basic)
TP0523     52.95        116           221           323        UDP-N-acetylglucosamine--N-acetylmuramyl-
                                                               (pentapeptide) pyrophosphoryl-undecaprenol N-
                                                               acetylglucosamine transferase
TP0524     52.06        108           230           254        ATP-dependent protease LA (lon)
TP0525     49.91        118           327           434        translation elongation factor P
TP0526      49.5         78           251           355        ATP-dependent helicase
TP0527     52.79        148           404           399        V-type ATPase subunit D
TP0528     52.08        103           238           241        V-type ATPase subunit B
TP0529     54.66         80           180           275        V-type ATPase subunit A
TP0530     55.61         92           315           306        hypothetical protein
TP0531     57.44        190           489           531        possible V-type ATPase subunit F
TP0532     49.35        150           475           480
TP0533     53.52         74           224           220        possible V-type ATPase subunit I
TP0534     54.94         71           340           295        hypothetical protein
TP0535     60.48 *      308 ***       600 *         511        hypothetical protein(acidic)
TP0536     58.15        215 *         460           463        hypothetical protein(basic)
TP0537     56.36        133           355           363        triosephosphate isomerase
TP0538     54.02         74           248           252        phosphoglycerate kinase
TP0539      51.6        188           609 *         704 **     hypothetical protein
TP0540     50.41        183           484           531        anti-sigma factor F/B antagonist
TP0541     55.17         85           406           532        GTP-binding protein
TP0542     53.11         53           224           296        pyrophosphate--fructose 6-phosphate 1-
                                                               phosphotransferase, beta subunit
TP0543     52.13        125           373           382        Holliday junction DNA helicase, subunit A
TP0544     50.96         52           243           289        hypothetical protein
TP0545     51.22         98           223           311        D-galactose/ D-glucose binding protein
TP0546     55.26         45           192           285        periplasmic serine protease DO
TP0547     64.27 **     110           348           383        penicillin tolerance protein
TP0548     57.68        120           375           483        hypothetical protein(basic)
TP0549     55.32         87           358           525        ATP-dependent Clp protease
TP0550     56.23        125           244           285        thiophene and furan oxidation protein
TP0551     57.18        112           232           255        phosphatase
TP0552     57.25        152           428           390        hypothetical protein
TP0553     47.73         70           308           380        conserved hypothetical protein (integral membrane)
TP0554     54.65        116           362           394        phosphoglycolate phosphatase
TP0555     54.55         97           268           276        glutamate/ aspartate transporter
TP0556     54.04        113           316           259        asparagine synthetase A (aspartate--ammonia ligase)
TP0557     52.04         59           368           481        hypothetical protein
TP0558     56.51        127           296           396        conserved hypothetical protein (integral membrane)
TP0559     55.44         65           284           464        conserved hypothetical protein
TP0560     54.89         77           183           233        transketolase
TP0561     59.48 *      100           311           256        conserved hypothetical protein
TP0562     57.14         96           441           616 *      spore coat polysaccharide biosynthesis protein E
TP0563     55.96        120           495           621 *      hypothetical protein(basic)
TP0564     51.77         80           289           424        hypothetical protein
TP0565     50.33         86           267           326        hypothetical protein(basic)
TP0566     45.52 *       88           222           259        alginate O-acetylation protein
TP0567     50.32        149           393           306        conserved hypothetical protein
TP0568     55.08        114           360           351        4-hydroxy-2-oxoglutarate aldolase/ 2-dehydro-3-
                                                               deoxyphosphogluconate aldolase/ 2-dehydro-3-
                                                               deoxyphosphogalactonate aldolase
TP0569      56.5         88           254           231        aminopeptidase P
TP0570     56.11         91           321           302        hypothetical protein
TP0571     55.66        136           341           343        LemA protein
TP0572      56.3         95           360           352        hypothetical protein(basic)
TP0573     45.56 *      237 **       1059 *****    1182 *****  hypothetical protein(basic)
TP0574     54.07         89           314           283        47KDa integral membrane lipoprotein antigen
TP0575     58.96         82           348           512        phosphoenolpyruvate-protein phosphotransferase
                                                               (authentic frameshift - corrected)
TP0576     56.07         84           352           488        peptide chain release factor 2
TP0577     56.13         99           306           449        hypothetical protein(basic)
TP0578     54.46        133           371           481        cell division protein
TP0579     52.97        108           411           530        hypothetical protein
TP0580     46.93         82           256           361        ABC transporter; probable MSD component
TP0581     46.76         93           413           515        ABC transporter, ATP-binding protein
TP0582     50.84         79           280           377        ABC transporter, probable MSD protein
TP0583     53.66        222 *         888 ***       946 ****   hypothetical protein
TP0584     48.76         88           268           366        hypothetical protein(basic)
TP0585     54.54         48           253           370        dipeptide/oligopeptide ABC transporter periplasmic
                                                               binding protein
TP0586     53.57         83           186           335        leucyl-tRNA synthetase
TP0587     55.26        209 *         525           512        hypothetical protein
TP0588     48.43        105           274           386        conserved hypothetical protein
TP0589     50.38        203 *         352           349        histidine containing phosphocarrier protein HPr
TP0590     50.88        373 ****      591 *         605        hypothetical protein
TP0591     48.07        127           304           320        HPr kinase
TP0592     52.13         81           315           465        Treponema-specific protein, uncharacterized
TP0593     55.15        126           297           381        conserved hypothetical protein
TP0594     52.15        152           401           341        hypothetical protein
TP0595     52.13        117           369           364        adenylate kinase
TP0596      56.4         63           302           253        polynucleotide adenylyltransferase (plasmid copy
                                                               number control protein)
TP0597     48.91        170           480           505        hypothetical protein(basic)
TP0598     51.07         62           243           273        hypothetical protein
TP0599     48.17        175           366           377        hypothetical protein(acidic)
TP0600      48.3         94           260           302        conserved hypothetical protein/ possible zinc
                                                               protease
TP0601     52.57         92           341           328        conserved hypothetical protein
TP0602     48.55         83           309           314        CDP-diacylglycerol synthase (phosphatidate
                                                               cytidylyltransferase) (CDP-diglyceride synthetase)
                                                               (CDP-diglyceride pyrophorylase)
TP0603     53.07         87           362           378        conserved hypothetical protein
TP0604     53.01        134           319           290        ribosome recycling factor (ribosome releasing
                                                               factor)
TP0605     56.04        128           285           279        translation elongation factor TS
TP0606     50.06         90           352           274        30S ribosomal protein S2
TP0607     54.86        358 ****      830 ***       762 **     hypothetical protein(basic)
TP0608     58.11         87           385           420        hypothetical protein
TP0609     59.34 *      107           306           407        asparaginyl-tRNA synthetase
TP0610     54.83         91           214           360        Treponema pallidum repeat protein H (Msp)
TP0611     54.83        103           365           442        ABC transporter, ATP-binding protein
TP0612     52.19         73           307           403        conserved hypothetical protein
TP0613     52.88         85           284           408        conserved hypothetical protein
TP0614     54.46        102           294           409        NifS-like protein (nitrogen fixation protein)
TP0615      54.2        109           396           480        NifU protein homolog
TP0616     55.38         83           329           442        ribose 5-phosphate isomerase (phosphoriboisomerase)
TP0617     59.42 *       87           659 **        597        hypothetical protein(basic)
TP0618     61.34 *      175           585 *         538        hypothetical protein(acidic)
TP0619     60.86 *      119           400           412        hypothetical protein
TP0620     57.53        131           308           384        Treponema pallidum repeat protein I (Msp)
TP0621     56.46        141           270           340        Treponema pallidum repeat protein J
TP0622     55.46         88           252           253        hypothetical protein
TP0623     60.16 *       56           326           491        possible membrane-bound lytic murein
                                                               transglycosylase D (murein hydrolase D) (regulatory
                                                               protein DnrI)
TP0624     55.04         58           241           344        conserved hypothetical protein
TP0625     49.33         89           391           565        hypothetical protein(basic)
TP0626     49.19         79           343           506        probable exonuclease SbcD
TP0627     46.58        116           328           477        exonuclease SbcC
TP0628     51.66        102           297           419        conserved hypothetical protein/ possible nicotinate
                                                               phosphoribosyltransferase
TP0629     56.45         97           250           373        hypothetical protein
TP0630     49.94        101           363           486        chemotaxis protein methyltransferase
TP0631     53.43         97           226           315        protein-glutamate methylesterase
TP0632     56.68         68           238           345        tryptophanyl-tRNA synthetase
TP0633     53.26        120           329           434        protein-methionine-S-oxide reductase
TP0634     51.24         41           259           440        DNA ligase
TP0636     51.17        129           293           331        hypothetical protein
TP0637     52.74         66           250           317        tRNA delta(2)-isopentenylpyrophosphate transferase
TP0638     55.56        163           499           449        hypothetical protein
TP0639     55.59        100           274           369        methyl-accepting chemotaxis protein
TP0640     51.52        103           259           397        methyl-accepting chemotaxis protein (chemoreceptor)
TP0641        50         64           265           223        histidyl-tRNA synthetase
TP0642     49.72         65           257           377        phosphomannomutase
TP0643     46.67         62           346           500        DNA polymerase III, subunit epsilon
TP0644     47.54         67           228           265        lysyl-tRNA synthetase
TP0645     56.32        256 **        529           576        hypothetical protein
TP0646        50         70           324           330        conserved hypothetical protein
TP0647     49.45         82           355           343        seryl-tRNA synthetase
TP0648     50.64        101           236           263        conserved hypothetical protein
TP0649     47.42         81           280           290        hemolysin
TP0650     49.79        100           388           397        conserved hypothetical protein
TP0651     52.26         46           188           241        conserved hypothetical protein (integral membrane)
TP0652     54.09        126           406           451        spermidine/putrescine ABC transporter, ATP-binding
                                                               protein
TP0653      55.3        129           412           524        spermidine/putrescine ABC transporter, permease
                                                               protein
TP0654     50.25        155           425           501        Spermidine/putrescine ABC transporter, permease
                                                               protein
TP0655     47.61         44           291           432        spermidine/putrescine ABC transporter, periplasmic
                                                               binding protein
TP0656     56.57        207 *         833 ***       936 ***    hypothetical protein(basic)
TP0657     49.32        224 *         501           527        carbon storage regulator
TP0658     48.67        147           441           436        conserved hypothetical protein
TP0659        52         73           241           251        flagellar hook-associated protein 3
TP0660     51.25         98           283           284        flagellar hook-associated protein 1
TP0661     55.49        116           413           404        hypothetical protein
TP0662     53.41         75           271           284        fructose-bisphosphate aldolase
TP0663      54.9        134           392           397        FlaA homolog-1 (28KDa outer membrane protein)
TP0664     54.77        149           345           308        flagellar filament outer layer protein
TP0665     57.64        184           539           573        hypothetical protein(basic)
TP0666     53.95        214 *         540           524        hypothetical protein
TP0667     50.27         83           292           284        uridine kinase
TP0668     44.88 *      149           379           310        conserved hypothetical protein (integral membrane)
TP0669     44.39 *       66           266           298        DNA polymerase III, subunit alpha
TP0670     54.46        103           264           331        D-alanine--D-alanine ligase
TP0671        50         98           317           320        aminoalcoholphosphotransferase
TP0672     51.95         94           260           317        glycyl-tRNA synthetase
TP0673     56.36         35           216           217        glutamyl-tRNA synthetase
TP0674     63.53 **     115           379           349        hypothetical protein(basic)
TP0675     54.02         95           271           374        hypothetical protein(basic)
TP0676     61.23 *      253 **        495           526        hypothetical protein(acidic)
TP0677     59.08        140           353           322        hypothetical protein
TP0678     59.93 *      135           314           403        hypothetical protein(basic)
TP0679     53.02        167           451           509        hypothetical protein(basic)
TP0680     52.94         98           256           318        sialoglycoprotease (O-sialoglycoprotein
                                                               endopeptidase)
TP0681     56.58        174           269           285        alanine racemase
TP0682     57.33        144           392           410        cell division protein FtsJ
TP0683     54.03        152           320           453        octaprenyl-diphosphate synthase/
                                                               farnesyltranstransferase
TP0684     54.67        103           294           341        glucose/galactose binding lipoprotein
TP0685     50.74        141           285           371        ABC transporter, galactoside transport ATP-binding
                                                               protein
TP0686     51.98         82           218           286        ribose/galactose ABC transporter, permease protein
TP0687     42.52 **      61           424           461        DNA recombinase
TP0688     39.07 ***    107           475           503        mccF-like protein (immunity protein)
TP0689     43.84 **     118           301           339        GTP-binding protein
TP0690     44.73 *      115           376           409        hypothetical protein
TP0691     46.96        113           321           330        conserved hypothetical protein
TP0692     51.15        122           267           256        recA protein
TP0693     56.82         60           292           257        hypothetical protein
TP0694     58.67         92           522           690 **     possible 5,10-methenyltetrahydrofolate synthetase
                                                               (5-formyltetrahydrofolate cyclo-ligase)
TP0695     59.94 *       59           355           534        conserved hypothetical protein
TP0696     54.56        102           245           259        conserved hypothetical protein
TP0697      56.6        160           377           331        hypothetical protein
TP0698     53.22         84           395           280        hypothetical protein
TP0699     56.48        486 ******    698 **        654 *      hypothetical protein(acidic)
TP0700     57.18        158           565           515        hypothetical protein(acidic)
TP0701     51.74        205 *         572 *         530        hypothetical protein
TP0702     60.49 *      231 **        478           544        conserved hypothetical protein/ possible lipoprotein
                                                               NlpD
TP0703     57.82        100           340           335        hypothetical protein(basic)
TP0704     53.26         59           251           259        single-stranded-DNA-specific exonuclease
TP0705     55.62         28           191           230        penicillin-binding protein
TP0706     56.49         82           279           318        conserved hypothetical protein/ possible lysostaphin
TP0707     63.94 **     122           279           304        hypothetical protein(basic)
TP0708     58.48        132           376           419        hypothetical protein(acidic)
TP0709     51.08        105           275           382        RNA polymerase sigma factor WhiG
TP0710     52.39         82           266           415        conserved hypothetical protein
TP0711     53.16        122           447           432        conserved hypothetical protein
TP0712      44.3 *       97           329           355        ATP-binding protein
TP0713     42.94 **     100           328           403        flagellar-associated GTP-binding protein (flagellar
                                                               biosynthesis protein)
TP0714        43 **      59           377           411        flagellar biosynthesis protein
TP0715     41.67 **      74           345           401        flagellar export protein (flagellar biosynthetic
                                                               protein)
TP0716     43.77 **     122           339           391        flagellar biosynthetic protein
TP0717     47.87        168           442           481        flagellar biosynthetic protein
TP0718     48.71        124           302           285        flagellar biosynthetic protein
TP0719     55.85        112           302           270        hypothetical protein
TP0720     52.68        109           231           234        flagellar motor switch protein FliY
TP0721     51.36        110           276           275        flagellar motor switch protein
TP0722     50.73         81           254           246        flagellar protein
TP0723     56.06        216 *         763 **        754 **     hypothetical protein
TP0724     51.96        103           295           284        flagellar motor rotation protein B
TP0725     51.48        119           325           321        flagellar motor rotation protein A (chemotaxis
                                                               protein MotA)
TP0726     46.15        217 *         521           568        possible flagellar protein
TP0727     50.68        100           244           233        flagellar hook protein
TP0728     54.03        103           395           385        flagellar hook assembly scaffolding protein
TP0729     62.77 **     134           370           269        treponemal aqueous protein
TP0730     55.43         82           379           510        phosphatidyltransferase
TP0731     59.04        141           360           500        conserved hypothetical protein
TP0732     62.12 **     133           266           355        methylenetetrahydrofolate dehydrogenase/
                                                               methenyltetrahydrofolate cyclohydrolase
TP0733     59.36 *      161           606 *         652 *      hypothetical protein
TP0734     57.51        111           372           393        purine nucleoside phosphorylase
TP0735     55.21         75           263           257        glutamate synthase
TP0736     51.85         94           280           340        possible hydrogenase gamma chain homolog (conserved
                                                               hypothetical protein)
TP0737     52.22         72           316           478        sugar ABC transporter, periplasmic binding protein
TP0738     59.16        187           527           535        conserved hypothetical protein
TP0739      45.9 *       61           256           265        conserved hypothetical protein
TP0740     55.67        182           445           400        conserved hypothetical protein
TP0741     55.39        106           333           381        conserved hypothetical protein
TP0742      57.8        107           228           231        GTP-binding protein
TP0743     54.41        226 *         635 **        578        50S ribosomal protein L27
TP0744      57.1        151           503           396        hypothetical protein
TP0745     52.06        161           568 *         550        50S ribosomal protein L21
TP0746     51.09         89           231           149        pyruvate orthophosphate dikinase
TP0747     50.19        167           353           276        hypothetical protein(basic)
TP0748     48.33        121           334           221        cytoplasmic filament protein A
TP0749     38.36 ***    157           644 **        777 **     hypothetical protein(basic)
TP0750     52.32        103           509           635 *      hypothetical protein (basic)
TP0751     56.68        103           397           545        hypothetical protein
TP0752     54.65         95           310           278        hypothetical protein
TP0753     47.87        149           436           471        hypothetical protein
TP0754     48.83         60           279           268        conserved hypothetical protein
TP0755      48.7         85           403           357        PTS system nitrogen regulatory IIA component/ PTS
                                                               system nitrogen regulatory BC component
TP0756     55.38        127           389           292        methionyl-tRNA formyltransferase
TP0757     55.56        133           328           263        polypeptide deformylase
TP0758     48.79        242 **        648 **        542        30S ribosomal protein S21
TP0759      54.7        214 *         842 ***       909 ***    hypothetical protein
TP0760     54.35         69           393           563        penicillin-binding protein
TP0761     53.88         89           353           447        hypothetical protein(basic)
TP0762     57.76         85           282           399        hypothetical protein(basic)
TP0763     53.99         73           276           383        hypothetical protein(basic)
TP0764     53.79         57           257           344        conserved hypothetical protein
TP0765     52.98         96           235           316        cell division protein FtsH
TP0766     57.79        122           322           409        hypothetical protein
TP0767     53.05         89           246           320        translation elongation factor G
TP0768     56.14        138           361           403        membrane protein
TP0769        56        133           328           350        outer membrane protein
TP0770     53.52         98           290           406        ATP-dependent RNA helicase DEAD-family
TP0771     46.32         32           229           264        conserved hypothetical integral membrane protein/
                                                               possible sodium,phosphate cotransport protein
TP0772     50.85        102           323           350        hypothetical protein
TP0773     55.78         98           291           355        periplasmic serine protease DO
TP0774     50.74        108           396           490        possible Mg2+ transport ATPase protein C
TP0775     55.45        121           433           597        endonuclease III
TP0776     57.36        128           375           303        conserved hypothetical protein/ possible ComF-
                                                               related protein
TP0777     50.45        219 *         646 **        540        hypothetical protein
TP0778     54.02         96           298           353        beta-lactamase regulatory homolog
TP0779     50.47        127           323           334        conserved hypothetical protein/ possible dedA
                                                               protein
TP0780     55.45        121           317           269        conserved hypothetical protein/ possible NH(3)-
                                                               dependent NAD(+) synthetase
TP0781     54.68        111           475           488        hypothetical protein
TP0782      51.7        135           558           602        hypothetical protein
TP0783     51.99         97           321           331        hypothetical protein
TP0784     54.94        132           483           596        hypothetical protein
TP0785     49.85        109           444           607        conserved hypothetical protein
TP0786     52.46        126           467           605        ABC transporter, ATP-binding protein
TP0787     51.56        165           369           386        hypothetical protein
TP0788     58.33        117           352           474        hypothetical protein
TP0789     51.03        100           267           281        hypothetical protein(basic)
TP0790      50.3         53           148           185        SecD/SecF antibiotic transport protein
TP0791     54.32        179           562           601        hypothetical protein
TP0792     53.03        133           390           396        flagellar filament 33 kDa core protein
TP0793     49.47         53           229           394        hypothetical protein(basic)
TP0794     53.28         76           216           229        S-adenosylmethionine synthetase
TP0795     56.41        319 ***       686 **        813 ***    hypothetical protein(basic)
TP0796     56.22         92           249           217        thiamine biosynthesis lipoprotein
TP0797     56.91        131           326           406        pyrroline-5-carboxylate reductase
TP0798     53.88         61           207           244        methionyl-tRNA synthetase
TP0799     47.33        187           698 **        740 **     hypothetical protein(basic)
TP0800     57.93         85           307           467        serine-type D-Ala-D-Ala carboxypeptidase
                                                               (penicillin-binding protein)
TP0801     48.87         64           228           275        ATP-dependent Clp protease subunit A
TP0802     55.35        160           637 **        725 **     hypothetical protein(basic)
TP0803      49.5         82           271           398        hypothetical protein
TP0804     48.06         51           346           479        sugar ABC transporter, ATP-binding protein
TP0805     55.65         97           197           290        ribonuclease II
TP0806     55.69        104           248           286        possible FemA protein/ possible FemB protein
TP0807     55.38        232 **        569 *         503        50S ribosomal protein L32
TP0808     48.29        268 **        724 **        699 **     acyl carrier protein
TP0809     56.96         92           367           496        ribonuclease III
TP0810     55.12         87           359           472        DNA adenine methyltransferase
TP0811     44.72 *      344 ****      728 **        750 **     hypothetical protein
TP0812     56.72        116           258           425        long-chain-fatty-acid--CoA ligase (authentic
                                                               frameshift - corrected)
TP0813     55.14        112           227           273        hypothetical protein(basic)
TP0814     53.31         75           318           339        thioredoxin reductase
TP0815     52.19        137           315           455        hypothetical protein(basic)
TP0816     52.19        119           324           302        hypothetical protein
TP0817     52.39         63           226           250        enolase
TP0818     52.67        169           744 **        742 **     hypothetical protein(basic)
TP0819     51.29        105           262           290        conserved hypothetical protein
TP0820     55.99         80           294           367        conserved hypothetical protein (basic)
TP0821     53.98         94           285           347        29 KD lipoprotein
TP0822     55.37        118           361           373        conserved hypothetical protein
TP0823     55.47        151           465           495        desulfoferrodoxin
TP0824     56.08         60           358           494        1-deoxyxylulose 5-phosphate synthase
TP0825     63.39 **     169           695 **        740 **     hypothetical protein(basic)
TP0826     51.16         73           364           485        conserved hypothetical protein
TP0827     53.49         66           236           359        hypothetical protein
TP0828     49.33         93           499           573        holo-acyl-carrier protein synthase
TP0829      45.8 *      108           319           474        conserved hypothetical protein
TP0830     51.07         73           458           596        pseudouridylate synthase I
TP0831     50.25         51           207           248        arginyl-tRNA synthetase
TP0832     56.09         73           288           303        hypothetical protein
TP0833     56.25        102           385           479        hypothetical protein(basic)
TP0834     51.92         95           308           346        tyrosyl-tRNA synthetase
TP0835     53.39         59           161           228        ankyrin repeat protein
TP0836     53.28        167           396           396        hypothetical protein(basic)
TP0837     57.94         51           297           440        threonyl-tRNA synthetase
TP0838     46.57         91           252           284        ABC transporter, ATP-binding protein (NBD-NBD
                                                               fusion)
TP0839     50.55        143           321           389        hypothetical protein(basic)
TP0840      49.8         82           313           467        hypothetical protein (integral membrane)
TP0841     52.85         84           246           275        periplasmic serine protease DO
TP0842     55.16         91           319           407        methionine aminopeptidase
TP0843     54.74        103           356           404        conserved hypothetical protein/ possible heat-shock
                                                               protein
TP0844     54.95        117           330           328        glyceraldehyde 3-phosphate dehydrogenase
TP0845     62.07 **      98           445           427        conserved hypothetical protein
TP0846     54.01        162           496           404        hypothetical protein(acidic)
TP0847      50.6        147           510           523        hypothetical protein(acidic)
TP0848     52.73        200           546           435        50S ribosomal protein L20
TP0849     45.45 *      265 **        455           510        50S ribosomal protein L35
TP0850     51.58         89           357           288        translation initiation factor 3
TP0851     47.05         77           435           609 *      hypothetical protein
TP0852     48.49         97           269           245        prolipoprotein diacylglyceryl transferase
TP0853        47        136           334           306        ATP-binding protein
TP0854     48.53         24           154           255        hypothetical protein
TP0855     56.29        101           147           276        hypothetical protein
TP0856     58.56        124           359           418        hypothetical protein
TP0857     65.09 **     167           496           620 *      hypothetical protein(basic)
TP0858     58.09        117           418           471        hypothetical protein
TP0859     64.66 **     174           486           560        hypothetical protein(basic)
TP0860     59.31 *      146           349           424        hypothetical protein(basic)
TP0861     56.96         71           296           322        glucosamine-fructose-6-phosphate aminotransferase
TP0862     54.17        172           432           321        peptidyl-prolyl isomerase (macrophage infectivity
                                                               potentiator)
TP0863        58         86           350           532        nitrogen fixation protein homolog (aminotransferase)
TP0864     55.68         91           299           320        conserved hypothetical protein
TP0865     54.56         64           251           332        hypothetical protein(basic)
TP0867     57.38        313 ***       685 **        703 **     hypothetical protein(basic)
TP0868     54.66        173           461           511        flagellar filament 34.5 kDa core protein
TP0869     55.56        231 **        505           605        hypothetical protein(basic)
TP0870     53.68        124           308           388        flagellar filament 31 kDa core protein
TP0871     46.54        120           761 **        756 **     hypothetical protein(basic)
TP0872     53.97         76           245           377        possible flagellar hook-associated protein 2
                                                               (flagellar filament cap protein)
TP0873     46.67        125           351           414        hypothetical protein(acidic)
TP0874     46.52        166           544           513        conserved hypothetical protein (basic)
TP0875     57.04        212 *         437           513        conserved hypothetical protein
TP0876     52.64        160           441           559        conserved hypothetical protein/ possible
                                                               endopeptidase
TP0877     43.38 **      90           344           454        conserved hypothetical protein/ possible regulatory
                                                               protein
TP0878     44.09 *       80           352           418        hypothetical protein(basic)
TP0879     43.48 **     119           305           340        hypothetical protein
TP0880     42.19 **      98           409           399        ABC transporter, possible membrane spanning protein
TP0881     47.01         80           367           414        ABC transporter, ATP-binding protein
TP0882     42.93 **      65           375           407        hypothetical protein
TP0883     38.03 ***     92           403           380        conserved hypothetical protein (integral membrane)
TP0884     45.12 *      109           329           380        conserved hypothetical protein (integral membrane)
TP0885     56.39        178           420           462        deoxyuridine 5'-triphosphate nucleotidohydrolase
TP0886     53.56        108           239           196        polyribonucleotide nucleotidyltransferase
TP0887     53.56        172           487           424        30S ribosomal protein S15
TP0888     60.61 *      129           378           338        riboflavin kinase/ FMN adenylyltransferase
TP0889     56.47         73           291           258        tRNA pseudouridine 55 synthase
TP0890     49.21        164           378           423        ribosome-binding factor A
TP0891     52.89         68           254           195        translation initiation factor 2
TP0892     49.69         99           272           251        N utilization substance protein A (transcription
                                                               terminator)
TP0893     58.33         79           443           453        hypothetical protein
TP0894     51.27         79           347           380        conserved hypothetical protein
TP0895     53.97         78           417           459        hypothetical protein(basic)
TP0896        50        288 ***       603 *         631 *      hypothetical protein(basic)
TP0897     51.59        110           308           277        Treponema pallidum repeat protein K (Msp)
TP0898        58         65           223           264        possible ATP-dependent nuclease
TP0899     53.85        127           431           389        hypothetical protein
TP0900     55.83        122           274           258        hypothetical protein
TP0901     51.35         95           288           293        conserved hypothetical protein (integral membrane)
TP0902     55.86        109           333           319        carboxylesterase
TP0903     57.83         83           318           475        UDP-N-acetylmuramoylalanine--D-glutamate ligase
TP0904      50.6        140           578 *         661 *      hypothetical protein(basic)
TP0905     60.16 *      150           464           467        30S ribosomal protein S16
TP0906     55.83        169           596 *         548        conserved hypothetical protein
TP0907     57.28        122           414           407        conserved hypothetical protein/ possible 16S rRNA
                                                               processing protein
TP0908     55.73        102           403           504        tRNA (guanine-N1)-methyltransferase
TP0909      52.3        217 *         419           583        50S ribosomal protein L19
TP0910     57.19        123           326           440        hypothetical protein(basic)
TP0911        49        132           461           542        conserved hypothetical protein/ possible flagellar
                                                               biosynthetic protein FlhB
TP0912     47.65         62           260           356        conserved hypothetical protein
TP0913     48.94        160           398           415        conserved hypothetical protein
TP0914     48.18        182           467           499        conserved hypothetical protein
TP0915     49.85         93           279           333        conserved hypothetical protein
TP0916     56.35        148           794 ***       856 ***    hypothetical protein
TP0917      48.4         71           266           407        Mg2+ transport protein
TP0918     61.61 **      79           493           642 *      hypothetical protein (integral membrane) (basic)
TP0919     49.52        156           467           547        thioredoxin
TP0920     54.64        107           212           363        hypothetical protein
TP0921     49.51         76           276           385        NADH oxidase/ NADH peroxidase
TP0922     65.39 **     210 *         430           527        hypothetical protein(basic)
TP0923     56.75        113           352           395        hypothetical protein
TP0924     55.57         44           314           473        hypothetical protein/ possible Tex protein
TP0925     53.42        180           425           479        flavodoxin
TP0926     56.32         64           296           363        possible signal peptidase I
TP0927     52.89        135           503           620 *      hypothetical protein(basic)
TP0928     59.49 *      157           394           451        hypothetical protein(basic)
TP0929     55.34        108           364           473        hypothetical protein(acidic)
TP0930     50.73         84           279           430        hypothetical protein(basic)
TP0931     46.22        117           258           267        possible trehalase (conserved hypothetical protein)
TP0932     54.44        301 ***       772 ***       837 ***    hypothetical protein
TP0933     51.36        106           225           275        UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-
                                                               diaminopimelate ligase
TP0934     49.22         67           317           448        neutral amino acid transporter
TP0935     50.53         85           295           297        esterase/ acetylhydrolase
TP0936     52.29         83           255           252        probable hemolysin C
TP0937     53.87        133           354           343        conserved hypothetical protein
TP0938     55.19        142           307           331        hypothetical protein
TP0939     51.49         63           211           190        pyruvate-flavodoxin dehydrogenase (pyruvate-
                                                               ferredoxin oxidoreductase)
TP0940     55.07        159           530           564        hypothetical protein
TP0941     50.58        100           368           349        hypothetical protein(acidic)
TP0942     56.71        172           469           432        hypothetical protein(acidic)
TP0943     51.35        123           501           411        flagellar protein FliS/ flagellar protein FlaJ
TP0944     53.25         78           328           273        conserved hypothetical protein
TP0945     54.59        115           266           269        ribulose-phosphate 3-epimerase (pentose-5-phosphate
                                                               3-epimerase)
TP0946     57.36        103           484           639 *      glucose-inhibited division protein B
TP0947     52.71        131           331           380        peptidyl-prolyl cis-trans isomerase (cyclophilin B)
TP0948     51.52        102           322           257        spoIIIJ-associated protein (Jag-like protein)
TP0949     51.33         55           207           200        60 kDa inner-membrane protein homolog
TP0951     60.13 *      267 **        526           642 *      50S ribosomal protein L34
TP0952     49.18         66           340           351        possible lipase precursor
TP0953     56.23         86           334           355        pheromone shutdown protein
TP0954     53.42        110           256           265        conserved hypothetical protein (containing TPR
                                                               domains)
TP0955     54.44        242 **        660 **        700 **     hypothetical protein(basic)
TP0956     56.14         62           262           330        hypothetical protein
TP0957     50.19         78           374           476        possible Tp33-related protein
TP0958     52.64         55           227           362        conserved hypothetical (integral membrane)
TP0959     54.78         96           325           322        hypothetical protein (possible FlgJ protein)
TP0960     53.03         85           247           296        flagellar basal-body rod protein FlgG
TP0961     47.23         68           319           299        flagellar hook basal-body protein FlgG
TP0962     50.81         87           202           257        conserved hypothetical integral membrane protein/
                                                               possible ABC transporter, ATP-binding protein
TP0963      52.4         44           187           223        conserved hypothetical integral membrane protein/
                                                               possible ABC transporter, ATP-binding protein
TP0964     54.89         72           287           380        ABC transporter, ATP-binding protein
TP0965     53.23        152           275           343        possible membrane fusion protein
TP0966     58.95         72           254           296        hypothetical protein(basic)
TP0967     60.28 *       87           316           364        hypothetical protein
TP0968        60 *      121           274           280        hypothetical protein(basic)
TP0969     57.45         73           293           265        hypothetical protein
TP0970     56.14        342 ****      692 **        658 *      hypothetical protein(basic)
TP0971     55.23        203 *         378           329        membrane antigen, pathogen-specific
TP0972     59.15         99           399           322        conserved hypothetical protein (integral membrane)
TP0973     57.87         68           374           547        phenylalanyl-tRNA synthetase alpha subunit
TP0974     56.63        222 *         478           443        hypothetical protein(acidic)
TP0975     59.49 *       80           287           236        conserved hypothetical protein
TP0976     58.68        104           221           377        hypothetical protein
TP0977     56.99         94           315           430        conserved hypothetical protein
TP0978     50.08         95           396           439        signal peptidase II (lipoprotein signal peptidase)
TP0979     51.75         92           383           463        conserved hypothetical protein
TP0980     54.71         82           215           348        conserved hypothetical protein/ possible
                                                               transcriptional regulator
TP0981      49.1        126           322           464        conserved hypothetical protein/ possible PleD gene
                                                               product
TP0982     47.12        148           312           339        conserved hypothetical protein
TP0983     53.22        155           421           521        hypothetical protein(basic)
TP0984      48.3         87           231           231        heat shock protein 90 (High temperature protein G)
TP0985     54.32         57           250           372        aspartyl-tRNA synthetase
TP0986     53.29         72           330           431        conserved hypothetical protein (integral membrane)
TP0987     55.95        142           595 *         684 **     hypothetical protein(basic)
TP0988     52.04         59           306           422        conserved hypothetical protein (integral membrane)
TP0989     57.59         96           308           386        P26-related protein
TP0990     52.79         88           202           359        conserved hypothetical protein
TP0991     54.49        318 ***       587 *         628 *      rubredoxin
TP0992     62.11 **     216 *         652 **        741 **     conserved hypothetical protein
TP0993     58.28         60           326           271        possible rare lipoprotein A- related protein
TP0994     54.89         75           290           383        conserved hypothetical protein
TP0995     46.18         57           270           410        hypothetical protein/ possible cyclic nucleotide
                                                               binding protein
TP0996     50.43         81           198           214        conserved hypothetical protein
TP0997     51.12         55           220           205        protease IV
TP0998     50.57         83           242           245        amino acid transporter/ probable sodium,proton-
                                                               dependent alanine transporter
TP0999     52.82         63           291           446        cell division protein (FtsK-related protein)
TP1000     53.36        129           408           474        hypothetical protein
TP1001     51.99         94           246           286        hypothetical protein
TP1002     49.55         93           433           434        conserved hypothetical protein
TP1003     53.04        127           360           509        hypothetical protein(basic)
TP1004     56.05        105           388           403        recombination protein RecR
TP1005     50.47         93           267           294        DNA polymerase III subunits gamma and tau
TP1006      48.4         58           298           279        DNA gyrase subunit B (DNA topoisomerase II)
TP1007     52.24        115           321           272        thymidylate synthase-complementing protein
TP1008     47.65         38           199           239        ribonucleoside-diphosphate reductase alpha chain
                                                               (Ribonucleotide reductase alpha chain)
TP1009     52.06         88           307           316        glycerol-3-phosphate dehydrogenase (NAD(P)H-
                                                               dependent dihydroxyacetone-phosphate reductase)
TP1010     51.45        158           415           401        nucleoside-diphosphate kinase
TP1011      50.5         70           401           467        peptidyl-tRNA hydrolase
TP1012     50.16         85           275           328        RNA polymerase sigma-70 factor (Sigma A)/ possible
                                                               sigma-43
TP1013     48.11        210 *         593 *         656 *      chaperonin (heat shock protein GroES)
TP1014     56.47         93           211           263        hypothetical protein(basic)
TP1015     53.43        169           417           427        N utilization substance protein B
TP1016     49.49        125           339           283        basic membrane protein (Bmp)
TP1017      54.6         85           176           184        alanyl-tRNA synthetase
TP1018     53.04        129           305           374        conserved hypothetical protein
TP1019     54.42        110           382           434        hypothetical protein/ possible glu-tRNA
                                                               amidotransferase, subunit C
TP1020     55.73         77           238           331        amidase/ possible glu-tRNA amidotransferase subunit
                                                               A
TP1021     52.26         57           190           314        glu-tRNA amidotransferase subunit B/ PET112-like
                                                               protein
TP1022     49.82        103           271           292        DNA repair protein RadA (DNA repair protein Sms)
TP1023     54.67        193           412           343        probable RecX protein
TP1024     58.14        171           396           353        30S ribosomal protein S9
TP1025     57.04        114           429           379        50S ribosomal protein L13
TP1026     53.54        122           277           445        oligoendopeptidase
TP1027     54.65        118           454           591        uridine phosphorylase
TP1028     55.52         51           216           333        DNA helicase II
TP1029      61.7 **     154           556           678 **     possible ATP-dependent RNA helicase
TP1030     62.22 **     196           430           562        hypothetical protein(basic)
TP1031     57.98        149           423           507        Treponema pallidum repeat protein L (Msp)
TP1032     69.91 ***    178           650 **        714 **     hypothetical protein
TP1033     61.95 **     141           565           499        conserved hypothetical protein
TP1034     62.85 **     126           527           695 **     conserved hypothetical protein (integral membrane)/
                                                               possible Na+-Ca+ exchange protein
TP1035     53.63         78           229           224        valyl-tRNA synthetase
TP1036     50.46         81           293           451        heavy metal-transporting ATPase/ cation-transporting
                                                               ATPase
TP1037     49.72        163           301           316        hemolysin III
TP1038     50.85        169           370           395        antigen TpF1 (antigen C1-5) (antigen 4D)
TP1039     53.68        147           311           392        adenine phosphoribosyltransferase
TP1040     52.23         78           275           346        lysyl-tRNA synthetase
TP1041     47.68         83           317           376        ATP-dependent Clp protease proteolytic component


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